Pairwise Alignments

Query, 1297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1223 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  370 bits (950), Expect = e-106
 Identities = 352/1303 (27%), Positives = 573/1303 (43%), Gaps = 137/1303 (10%)

Query: 42   LVVYIPLLFLVLLAL--VLGTPFGARIAVSLAASLVPNFSASYVSGTINRDLALSDIRWS 99
            L+  + L+ L+LL++  +LGT  G+R  +      VP  S     G +    +   + W 
Sbjct: 9    LLAMLSLVALLLLSIGALLGTQAGSRWTLGQ----VPGLSVENFQGRLGGQWSADHLLWQ 64

Query: 100  MDGIAVEGKALLVEWQPSCLLAKGLCVQNLSLDGLALVIETDKLPKGESEPAPATEKLIL 159
              G  VE    L  W P CLL   LC++ L  + + L   +    +  S P    E L L
Sbjct: 65   QTGSRVELNKPLFAWSPLCLLRMTLCIEQLKAEQVILQFASSS--EASSGPISLPE-LKL 121

Query: 160  PFSISLDKAQLTSVDVRVDTMKFGADYLMAAAKWQEDGLKVDELQSRGLQVFIPIPGEAD 219
            P +I L + Q+ S+ +           L  AA W   GL++D +                
Sbjct: 122  PVAIQLGEVQIGSLLLNGSEQ---LKDLQLAAHWTAKGLQIDSVH--------------- 163

Query: 220  TGAQGSTITSDNTAMDSAA---PTEGSWPLASLPTIALPMNLQLLKADLTDTHLAILGED 276
                   +  D+ ++D +    PT G+WPL++   + LP   +   A      LA+  + 
Sbjct: 164  -------LQRDDLSLDLSGLLQPT-GNWPLSAEGKLTLPAPGKAPWA------LALKVDG 209

Query: 277  EVISRLLLGADFEG---SALT--LQELKLEHPEAELELKGTVDLSADYPMALKLNV---- 327
            +++  L L AD  G     LT  LQ L    P            SAD P  L+LN     
Sbjct: 210  DLLKTLNLRADSSGYLQGQLTGELQPLVENLPAKVRITADGFKASADLPDTLQLNQLELT 269

Query: 328  -NTHSPSRFPDIGEQQLQLDVNGNLSQLTLKVQAKGTLNFELDAGAALT-NPEVPFTLTL 385
             N    S +  +G+  L  +       L  KV AKG     LD  A+ T N ++   L  
Sbjct: 270  GNGDLKSGYQLLGKATLPAEQGPVGLLLQGKVDAKGAQIAGLDLSASDTQNLKLSGQLDW 329

Query: 386  SK-----ANVGWPLQAPEYQGQELSV---VASGNLNAQQASINGNVITPFHTPL------ 431
            S+     A + W L  P ++   L     VA  + N + +  +GN +  F   L      
Sbjct: 330  SEGFSAEAKIDW-LDFPWHRLYPLIAEPQVALRSFNGEVSYRDGNYLGNFKAALDGPAGA 388

Query: 432  -LLNAVLSHQAQSLEITEAAVSGEPGNIHLSGTLNYADGLDWRAGVSFDKLTPSALVLPE 490
              L++  S     + + E  ++   G       L +ADG+ W   +    + P+  +   
Sbjct: 389  FSLSSPFSGDLTKIFLPEFKLAAGQGKAEGHLNLQFADGIAWDTALDLSAINPAYWLAEL 448

Query: 491  GVTLPKGSLDGAFETSGTFETRGTVKNQWQISLSQADIHGELAGFPVTLTGDVT-VNEKL 549
              TL           +G   ++G +K+Q     +  D+ G+L G P  L        E+ 
Sbjct: 449  PGTL-----------AGPLRSKGEMKDQHLSLNADLDLKGKLRGQPAVLQAKADGAGERW 497

Query: 550  HLSAQDFLLTAMGAKLTLNGNVEDDWDLQGLILAPDLSLLAEGLNGKFMANLDVSGSNKD 609
            +LSA    L     ++  +G+++     Q  I AP L  L   L G+    +DV+GS + 
Sbjct: 498  NLSALHIRLG--DNRIDGSGSLQQKLAGQIDIKAPRLGQLWPQLRGQLNGRVDVAGSLQA 555

Query: 610  PLVNLQAQGEAIKFGTTQLESLAIKGLYQPFAKHEFALSLKGSALQLGSRKLESVTLGAK 669
            P   L  QG  + F   +L+SL +        + +  + LKGS +Q G  +L ++T   +
Sbjct: 556  PQGKLSLQGVQLAFDDNRLQSLNLDASLDSAQRAK--IDLKGSGIQAGDTQLGTLTASGQ 613

Query: 670  GDINKQKLRAESFG-DIRLDTVVESQFDEKTQLIEASVTRFDLGSEFGDWGLSQDLHLTW 728
            GDI  QKL+ +  G  ++L   ++   D+        +   D+ +   DW L     +  
Sbjct: 614  GDIKSQKLQLDLLGPQLKLALGLDGNLDKGNW--RGRLASGDIQAGGQDWKLQNPAKIE- 670

Query: 729  ELASNSGTLNEACFTQGNNALC------LPRPATLGSTGDVAISFRGEPGAIIDKLLPTN 782
             LA    T    C+  G  +LC      +P P        +    +  P   + + LP +
Sbjct: 671  RLADGKLTFGAHCWMSGQASLCGEDQRLMPEPK-------LRYHLKQFPIDSLAQWLPKD 723

Query: 783  MDWKGKASLDAAVDWSPKRKPAGELSLVFEPGSVTLLRPKGKVVEVGFEALSAKASLSPE 842
              W GK + D  +D  P   P G++ +V   G    ++ K + ++  ++ L   ++L+P+
Sbjct: 724  FAWHGKLNADVQLDL-PASGPKGQI-MVDASGGTLRMKEKDQWLDFPYQTLKLTSTLTPK 781

Query: 843  TLTADLNLRSSRLATLDSRVEIAVTP-DRALGGYIHLDRIQLEALREFLPQLDTLQGEIS 901
             +   L+    +L  L  + +I   P  + L G   L  + L   R F+P ++ L G ++
Sbjct: 782  RIDTQLDFVGGKLGELMVQAQINPLPKSKPLSGSFRLSGLDLSVARPFVPMVEKLTGRLN 841

Query: 902  SELTLAGTLMSPEVSGNLALANGAFSASANPTLISDVDMLLAFAGQQASLNGSWVMGD-G 960
               +L+G L++P+V+GNL L++G  S    PT    + +    AG+   LNG W  G  G
Sbjct: 842  GSGSLSGGLLAPQVNGNLTLSDGEISGPQLPTRFEALQLQAQIAGESVQLNGGWKSGKAG 901

Query: 961  KGGIEGSLAWPDGQFSGELAVKGDKLAVIVPPMALLDVSPDVTLTFDAAMLDLKGSVNIP 1020
            +G + G +AW       +L++KG +L V V P A+L+V+PD+ ++ +   L + G V +P
Sbjct: 902  QGSLNGHVAWGQA-LVVDLSLKGTQLPVTVEPYAVLEVAPDLKISINNDKLAIVGKVQVP 960

Query: 1021 TGNIKIVQLAEGGVAVSPDVVFDDSIAEAEQKTSPYGVTADLNIRVG-DQVKIEGMGLKG 1079
             G I + +L    V VS D V      EA +   P  +  D+++ VG D++   G GL  
Sbjct: 961  KGEITVRELPPSTVKVSDDTVIVGHQTEAGK--PPMAMAMDIDVAVGEDKLSFTGFGLTA 1018

Query: 1080 RLDGTLRLQQQAFKPPLLFGDVKVLSGSYKFMGQTLKIPKGEVQFVGPPQLPNLNIEAIR 1139
             L G + +           G++ +  G Y+  GQ L + +  + F GP   P L+IEA+R
Sbjct: 1019 NLQGHVHIGDNMDTR----GELWLNDGRYRAYGQRLTVRRARLLFAGPIDQPYLDIEAVR 1074

Query: 1140 EIKDEDLIAGVRITGTGMAPEVTLFSNPSKEQAEILSYILKGKGFASNGSGDNNAL---M 1196
            +   +D+IAG+R++G+   P   +FS P+  Q + LSY++ G+   SNG  DNN L    
Sbjct: 1075 Q--TDDVIAGIRLSGSAEQPTTQIFSEPAMSQEQALSYLVLGRPLTSNGE-DNNMLAQAA 1131

Query: 1197 MGAALSLSSSLSGGAIGNIGSTATSLVEKFGFSNVQLDTNDEG---RVAISGYIGENLMV 1253
            +G  L  SS L+G           SL +  G  + QLDT   G    V  SG + E L +
Sbjct: 1132 LGLGLMGSSDLTG-----------SLAKDLGIQDFQLDTQGSGTTTSVVASGNLSEKLSL 1180

Query: 1254 KYGVGVFNPGYEMTVRYYLLSQLYLETVSGTVGQSLDIYYSFD 1296
            +YGVGVF P   + +RY L   +YLE  SG +  SLDI+Y  D
Sbjct: 1181 RYGVGVFEPANTIALRYKLSKMVYLEAASG-IASSLDIFYKRD 1222