Pairwise Alignments

Query, 1297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1222 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

 Score =  347 bits (889), Expect = 5e-99
 Identities = 338/1308 (25%), Positives = 571/1308 (43%), Gaps = 160/1308 (12%)

Query: 51   LVLLALVLGTPFGARIAVSLAASLVPNFSASYVSGTINRDLALSDIRWSMDGIAVEGKAL 110
            ++LLA+ LGT  G         + VP  +     G + +      + W  DG  VE +  
Sbjct: 12   VLLLAIALGTLLGTSAGSRWLLTQVPGLTVEAFEGRLGQRWQADRLIWEQDGSRVEVQQP 71

Query: 111  LVEWQPSCLLAKGLCVQNLSLDGLALVIETDKLPKGESEPAPATEKLILPFSISLDKA-Q 169
             + W P+CLL + LC+  L    + L           SEP P  E   LP  I+L  A Q
Sbjct: 72   RLAWSPACLLKRTLCIDELVTGSIELNFPP-------SEPDPNAEPFSLP-DINLPLALQ 123

Query: 170  LTSVDVRVDTMKFGADY--LMAAAKWQEDGLKVDELQSRGLQVFIPIPGEADTGAQGSTI 227
            +  +++   T+        L   A W+ DGL +  L  R   + + + G           
Sbjct: 124  VERIEIGQVTLNDAEQLRRLQLQANWRADGLDIQRLDVRRDDLDLTLTGRLQPSGNWPLQ 183

Query: 228  TSDNTAMDSAAPTEGSWPLASLPTIALPMNLQLLKADLTDTHLAILGEDEVISRLLLGAD 287
                 A+ S  P E  W L       L   LQL                +V S+  L   
Sbjct: 184  LQGQAALQS--PDEQPWALMIAIEGDLREQLQL----------------QVESQGYLQGS 225

Query: 288  FEGSALTLQELKLEHPEAELELKGTVDLSADYPMALKLNVNTHSPSRFPDIGE----QQL 343
              G    L E          +L  TV L+AD   AL            PD+ E      L
Sbjct: 226  LSGHVRALDE----------QLPATVRLNADGFKAL------------PDLPETLRLDDL 263

Query: 344  QLDVNGNL---------SQL-----TLKVQAKGTLN--------FELDAGA---ALTNPE 378
            +L  +GN+         +QL      ++V  +G ++         ELDAG       + +
Sbjct: 264  ELTASGNMQDGYRLLGTTQLPGEGGAVRVALEGVVSTTGAQIATLELDAGQQRHVRLSGD 323

Query: 379  VPFTLTLSK------ANVGWPLQAPEYQGQELSVVASGNLNAQQASINGNVITPFHTPLL 432
            V +   L+        +  W    PE +   +++     L AQ    +GN +  F + + 
Sbjct: 324  VDWQDGLAANADLLWRDFPWRRFYPEIEEPPVTL---RELKAQIQYQDGNYLGNFESAMT 380

Query: 433  -------LNAVLSHQAQSLEITEAAVSGEPGNIHLSGTLNYADGLDWRAGVSFDKLTPSA 485
                   LN+ +S   +++ + +  +    G+   S ++ +ADG+DW+A ++   L P+ 
Sbjct: 381  GPAGDFTLNSPVSGNLEAVHLPQLELRAGQGSATGSVSVGFADGIDWKADLALSDLDPAY 440

Query: 486  LVLPEGVTLPKGSLDGAFETSGTFETRGTVKNQWQISLSQADIHGELAGFPVTLTGDVT- 544
             +      LP G+L       GT +++G ++++   + +  DI+G L G   +L    + 
Sbjct: 441  WL----AELP-GNL------GGTLQSQGALRDERLQAEASLDINGRLRGQNTSLQLQASG 489

Query: 545  VNEKLHLSAQDFLLTAMGAKLTLNGNVEDDWDLQGLILAPDLSLLAEGLNGKFMANLDVS 604
              E+ +L   D  L     ++   G      D +  +    L+ L   L G+    + + 
Sbjct: 490  EGERWNLPVID--LRMGDNRVHGEGTWAQTLDGRVQLELRRLAQLWPDLRGQLSGEVTLG 547

Query: 605  GSNKDPLVNLQAQGEAIKFGTTQLESLAIKGLYQPFAKHEFALSLKGSALQLGSRKLESV 664
            G+   P   ++  G  + +   +L  L ++G      +    L L   +++ G   L ++
Sbjct: 548  GTAAAPSGKIELSGRNLAYQDNRLRRLNLQGQLSDGERGR--LVLNAESIRAGETDLGAL 605

Query: 665  TLGAKGDINKQKLRAESFGDIR-LDTVVESQFDEKTQLIEASVTRFDLGSEFGDWGLSQD 723
             + A G  +K +      G +  L   V+     +  L    +TR +L +E  +W L + 
Sbjct: 606  QVNADGSADKHQADLRLQGPLLDLALAVDGGLSGEDWL--GRLTRGELSAEQQNWALQRP 663

Query: 724  LHLTWELASNSGTLNEACFTQGNNALC------LPRPATLGSTGDVAISFRGEPGAIIDK 777
              L    A     L   C+  G  +LC      +P P       D A+    E       
Sbjct: 664  ATLQ-RFADGRLELGAHCWLSGPASLCAVDQRIMPDPRIRYRLRDFALQSLAE------- 715

Query: 778  LLPTNMDWKGKASLDAAVDWSPKRKPAGELSLVFEPGSVTLLRPKGKVVEVGFEALSAKA 837
             LP +  W+G+ + D  +D  P   P G + +   PG V  +R   +  +  ++ L   +
Sbjct: 716  YLPEDFRWQGELNADIELDL-PASGPNGRVQVDAGPG-VLRIRDADEWHDFPYQTLVLNS 773

Query: 838  SLSPETLTADLNLRSSRLATLDSRVEIAVTPD-RALGGYIHLDRIQLEALREFLPQLDTL 896
             L PE + ++L  +   L  LD +V I   P+ + + G   L  + L   R F+P ++ L
Sbjct: 774  RLLPERIDSELRFQGGELGELDVQVRIDPRPENKPIYGEFRLSGLDLAVARPFVPMVERL 833

Query: 897  QGEISSELTLAGTLMSPEVSGNLALANGAFSASANPTLISDVDMLLAFAGQQASLNGSWV 956
            +G+++    L+G+L  P ++G L L+ G  + S  PT   D+ + +   G++ S++G W 
Sbjct: 834  RGQLNGSGQLSGSLRQPTLNGQLLLSGGEIAGSELPTTFEDLRVRMLIEGERLSIDGDWR 893

Query: 957  MGD-GKGGIEGSLAWPDGQFSGELAVKGDKLAVIVPPMALLDVSPDVTLTFDAAMLDLKG 1015
             GD G+G + G+L W D     +LA+KG +L V+V P A L+V PD+ +      L + G
Sbjct: 894  AGDQGRGNLSGTLDWRDA-VDLDLAIKGSRLPVVVEPYADLEVEPDLRIVLSGQDLAVSG 952

Query: 1016 SVNIPTGNIKIVQLAEGGVAVSPDVVFDDSIAEAEQKTSPYGVTADLNIRVG-DQVKIEG 1074
             V +P G I + +L    V VS D V      EAE+  +P  V  D+++ VG D+++  G
Sbjct: 953  RVAVPRGAITVRELPPTTVRVSEDTVIVGR--EAEEPATPLAVKMDIDVEVGQDRLRFTG 1010

Query: 1075 MGLKGRLDGTLRLQQQAFKPPLLFGDVKVLSGSYKFMGQTLKIPKGEVQFVGPPQLPNLN 1134
             GL   L G L +           G++++ +G Y+  GQ L I + E+ F G    P LN
Sbjct: 1011 FGLTADLAGYLHIGDNLDAR----GELQLKNGRYRAYGQRLTIRRAELLFTGLISQPFLN 1066

Query: 1135 IEAIREIKDEDLIAGVRITGTGMAPEVTLFSNPSKEQAEILSYILKGKGFASNGSGDNNA 1194
            IEAIR I+ E+++AG+RITG+   P + +FS P+  Q + L+Y++ G+   ++ +GD+N 
Sbjct: 1067 IEAIRRIEAENVVAGLRITGSAEQPRIDVFSEPAMSQEQALAYLVLGRPLGAD-TGDSNL 1125

Query: 1195 L---MMGAALSLSSSLSGGAIGNIGSTATSLVEKFGFSNVQLDTNDEG---RVAISGYIG 1248
            L    +G  L+ SSS++GG           L ++ G  + QLDT   G    V  +G + 
Sbjct: 1126 LAQAALGLGLAGSSSITGG-----------LAQRLGIQDFQLDTEGTGAGTSVVATGRLT 1174

Query: 1249 ENLMVKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTVGQSLDIYYSFD 1296
            E L ++YGVGVF P   + +RY L  +++LE  SG +  SLD++Y  D
Sbjct: 1175 ERLALRYGVGVFEPTNTIALRYQLTRRIFLEAASG-LASSLDVFYRRD 1221