Pairwise Alignments

Query, 1297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1254 a.a., DUF490 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  431 bits (1108), Expect = e-124
 Identities = 331/1286 (25%), Positives = 595/1286 (46%), Gaps = 80/1286 (6%)

Query: 42   LVVYIPLLFLVLLALVLGTPFGARIAVSLAASLVPNFSASYVSGTINRDLALSDIRWSMD 101
            L+V + LL L L   +   P G  + +  A   +P        G +     L  + ++  
Sbjct: 16   LLVLVILLVLALAGALFTNP-GLHVVLWGAQQALPQLKVEQAQGALFPRFTLQGVNYADS 74

Query: 102  --GIAVEGKALLVEWQPSCLLAKGLCVQNLSLDGLALVIETDKLPKGESEPAPATEK--- 156
               ++   + L +   P+CLL   +C+  L+L G+ L    D     ESEPAP       
Sbjct: 75   ELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKL----DLPSLAESEPAPDEPDSEP 130

Query: 157  ---LILPFSISLDKAQLTSVDVRVDTMKFGADYLMAAAKWQEDGLKVDELQSRGLQVFIP 213
               +  P  I L +  L  +++ +   +     L   A WQ + L++ + + +G+++ + 
Sbjct: 131  LGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQTEWQGIRLAL- 189

Query: 214  IPGEADTGAQGSTITSDNTAMDSAAPTEGSWPLASLPTIALPMNLQLLKADLTDTHLAIL 273
                A++ A      +     DSA P +       LP + +P++++L + D+ D  L   
Sbjct: 190  ----AESEASTEPEAAQAATSDSAEPLQ-------LPDVMIPLHIELARFDIRDFRL--- 235

Query: 274  GEDE---VISRLLLGADFEGSALTLQELKLEHPEAELELKGTVDLSADYPMALKLNVNTH 330
             E E   +++ L L A      +++  L+L  PE + +L     LS DYP+ L+L    H
Sbjct: 236  -EQETPIIVNHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPIQLELRSQVH 294

Query: 331  SPSRFPDIGEQQLQLDVNGNLSQLTLKVQAKGTLNFELDAGAALTNPEVPFTLTLSKANV 390
                  D   Q L L   G+L+ LT++         +L++   L + ++PF L LS+   
Sbjct: 295  ----LADFKGQTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADIPFDLQLSQVKA 350

Query: 391  GWPLQAP-EYQGQELSVVASGNLNAQQASINGNVITPFHTPLLLNAVLSH-QAQSLEITE 448
             WP+    +Y  +   +   G+L   Q ++ G  +     P +  A+  H     + +  
Sbjct: 351  QWPMLGEGDYHVEVPELSIQGSLAKYQFALQG-ALQGKDLPNVSLALQGHGNLDEVALQS 409

Query: 449  AAVSGEPGNIHLSGTLNYADGLDWRAGVSFDKLTPSALVLPEGVTLPKGSLDGAFETSGT 508
              V    G +  +   N+ + L+W A ++   + P  L  PE     +G + G  +TSG 
Sbjct: 410  LKVDTLGGLVTGNAVANWKNPLNWAARLNLKNIQPG-LQWPEA----EGKISGELDTSGA 464

Query: 509  FETRGTVKNQWQISLSQADIHGELAGFPVTLTGDVTVNE-----KLHLSAQDFLLTAMGA 563
               +G     WQ+ +S+  I G L  +P+ + G+++ ++      + L  +   L     
Sbjct: 465  LTEQGG----WQVEVSRLAIKGVLRDYPLKMLGELSASDVQGQGDITLQTKGVSLVHGPN 520

Query: 564  KLTLNGNVEDDWDLQGLILAPDLSLLAEGLNGKFMANLDVSGSNKDPLVNLQAQGEAIKF 623
             LT  G +   W +   +  PDLS       GK + ++ + G  K P V L    +++++
Sbjct: 521  SLTAKGQLSKQWRMSVELDVPDLSKSLPDAKGKVIGDVLLRGDLKQPRVKLVLDADSLQW 580

Query: 624  GTT-QLESLAIKGLYQPFAKHEFALSLKGSALQLGSRKLESVTLGAKGDINKQKLRAESF 682
                 +  + ++G   P  + +  L+L+  A+Q   +++++V L A+G   K ++  +  
Sbjct: 581  QELGSIGHVTLQGNLVPLPEPQGELTLQVRAIQYQDQRIDTVDLKAQGSQRKHEVTLDVT 640

Query: 683  GDIRLDTVVESQF--DEKTQLIEASVTRFDLGSEFGDWGLSQDLHLTWELASNSGTLNEA 740
             D+   ++  +     E T   +  + R  L S  G W L Q   L+++  +   T+   
Sbjct: 641  SDLASTSLAMNGRLRTEPTLRWQGELERMWLNSPQGQWLLQQATALSFDQRTERVTVAAH 700

Query: 741  CFTQGNNALCLPRPATLGSTGDVAISFRGEPGAIIDKLLPTNMDWKGKASLDAAVDWSPK 800
            C+ QG  +LCL   A LG+ G+  ++ +      +  +LP      G  +      W+PK
Sbjct: 701  CWVQGEASLCLEEEAELGARGETRLAIKQFDFKQLAGVLPKETKLSGGLNGQVWAKWAPK 760

Query: 801  RKPAGELSLVFEPGSVTLLRPKGKVVEVGFEALSAKASLSPETLTADLNLRSSRLATLDS 860
              P  + +L    G VT  +   K V  G++     A L+   L A   L ++    L  
Sbjct: 761  AAPQLQANLELTQGQVT--QKLNKSVTFGWDKAQFSAQLAKNQLQASWLLDATDNGDLSG 818

Query: 861  RVEIAVT--PDRALGGYIHLDRIQLEALREFLPQLDTLQGEISSELTLAGTLMSPEVSGN 918
             ++IA      + + G ++L    L+ L+  + +L   +  I++++   G ++ P+++G 
Sbjct: 819  NIQIADVRAEQKTMLGSLNLTTFNLDFLQPLIGELSEAKSNINADVQFHGPMLHPQLNGE 878

Query: 919  LALANGAFSASANPTLISDVDMLLAFAGQQASLNGSWVMGDGKGGIEGSLAWPDGQ-FSG 977
            +A+ +       +P  +    + L F G QA LN      DG   ++G   W   + +  
Sbjct: 879  IAINDIRVKGEISPVDVQSGQVSLKFNGYQAVLNADIQTTDGLLEVDGDADWQQIEDWRL 938

Query: 978  ELAVKGDKLAVIVPPMALLDVSPDVTLTFDAAMLDLKGSVNIPTGNIKIVQLAEGGVAVS 1037
            +  V    + V +PPM  + V PD+TLT    +  + G++ +P G I + +L    + VS
Sbjct: 939  KARVHAPSMMVELPPMVRVKVIPDLTLTMQPQLARVTGNIALPWGRIVVEELPPSAIGVS 998

Query: 1038 PDVVFDDSIAE--AEQKTSPYGVTADLNIRVGDQVKIEGMGLKGRLDGTLRLQQQAFKPP 1095
             D +  ++  E   +++  P+ V +D+N+++GD  ++   GL+G L G L + Q+  K P
Sbjct: 999  KDQILLNADFEPLTDKERIPFSVESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQKD-KGP 1057

Query: 1096 LLFGDVKVLSGSYKFMGQTLKIPKGEVQFVGPPQLPNLNIEAIREIKD--EDLIAGVRIT 1153
             + G+V + +G Y+  GQ L+I +G++   GP   P L I AIR   +  + ++AGVR++
Sbjct: 1058 FILGEVNIRNGQYRSFGQDLQIKEGKILMNGPVDQPYLAITAIRNPNNTQDGVVAGVRVS 1117

Query: 1154 GTGMAPEVTLFSNPSKEQAEILSYILKGKGFASNGSGDNNALMMGAALSLSSSLSGGAIG 1213
            G    P +T+FS P+  QA  LSY+L+G+    +G    NA M    + LS + SG  +G
Sbjct: 1118 GPSDEPSLTIFSEPAMPQANALSYLLRGQNI--DGEAGGNA-MTTTLIGLSLAQSGKLVG 1174

Query: 1214 NIGSTATSLVEKFGFSNVQLDT---NDEGRVAISGYIGENLMVKYGVGVFNPGYEMTVRY 1270
             IG       + FG  ++QLDT    D+ +V +SGYI   L VKYGVG+FN   E TVRY
Sbjct: 1175 EIG-------QAFGVQDLQLDTAGSGDDSQVTVSGYILPGLQVKYGVGIFNSVGEFTVRY 1227

Query: 1271 YLLSQLYLETVSGTVGQSLDIYYSFD 1296
             L+  LYLE VSG V  ++D+ Y F+
Sbjct: 1228 RLMQDLYLEAVSG-VDSAVDLLYQFE 1252