Pairwise Alignments

Query, 1297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1271 a.a., translocation/assembly module TamB from Rahnella sp. WP5

 Score =  422 bits (1084), Expect = e-121
 Identities = 338/1298 (26%), Positives = 588/1298 (45%), Gaps = 66/1298 (5%)

Query: 35   LFKLVTRLVVYIPLLFLVLLALVLGTPFGARIAVSLAASLVPNFSASYVSGTINRDLALS 94
            LFK +    +   +L + L+A ++GT  G  + ++ A   VP  + +   G   RDL L 
Sbjct: 3    LFKKICLGFLIFLVLLISLVAFLVGTQTGLHLMINGANRFVPGLNIASTEGGW-RDLTLK 61

Query: 95   DIRWSMDGIAVEGKALLVEWQPSCLLAKGLCVQNLSLDGLALVIETDKLPKGESEPAPAT 154
             + + M G+ V+     +    SCL    LCV  L +  + +V+ T ++    ++P P  
Sbjct: 62   GVHYEMPGVDVKAGEFHLSLDFSCLKNSALCVNALRVKDVNVVVNTKEMTPAAAQPEPEN 121

Query: 155  EK----LILPFSISLDKAQLTSVDVRVDTMKFGADYLMAAAKWQEDGLKVDELQSRGLQV 210
             +    L  P+ I+L    L ++++ +D            A W+   +++   +  GL +
Sbjct: 122  SEPLTNLSTPYPITLRLLTLDNINITLDDRAISLASFRTGAHWEGRAIQLMPTRIGGLLI 181

Query: 211  FIP------IPG----------EADTG--AQGSTITSDNTAMDSAAPTEGSWPLASLPTI 252
             +P      +P           E  TG  AQ   +  +    ++         L  LP  
Sbjct: 182  ALPKTPVSPLPDVVQAAQDKAVEKATGKPAQPPVVVPEKPLGETLQELFAKPLLPELPDF 241

Query: 253  ALPMNLQLLKADLTDTHLAILGEDEV-ISRLLLGADFEGSALTLQELKLEHPEAELELKG 311
             LP++L + +  +   +L + G+ +V I+R  L A  +   + L +L +  P+  ++  G
Sbjct: 242  RLPVDLDIQQ--ILAENLRLTGDTDVLITRFELKASTQNQIVKLDKLMVRSPQGSVDGMG 299

Query: 312  TVDLSADYPMALKLNVNTHSPSRFPDIGEQQLQLDVNGNL-SQLTLKVQAKGTLNFELDA 370
               L+ ++P+ + LN   +       +  ++++L V G L  +L + +   G +  +L  
Sbjct: 300  QATLNQNWPVDMTLNTAVN----IDPLKGEKIKLKVAGGLRDKLDVGLNLSGPVRAQLAL 355

Query: 371  GAALTNPEVPFTLTLSKANVGWPLQA-PEYQGQELSVVASGNLNAQQASINGNVITPFHT 429
               L    +P  L L+   + WPL   P+YQ +      SG       S+  +       
Sbjct: 356  QTQLAEAGLPLDLQLTSDALQWPLTGTPQYQVKGFKFNVSGKATDYALSLRSDFKGEQIP 415

Query: 430  PLLLNAVLSHQAQSLEITEAAVSGEPGNIHLSGTLNYADGLDWRAGVSFDKLTPSALVLP 489
            P  L        +  +++   ++   GN  L+G ++++  + W + +   KLT       
Sbjct: 416  PATLTLDGKGNVEQFKLSLLRLAALEGNTDLTGVVDWSKAISWNSEL---KLT------- 465

Query: 490  EGVTLPKGSLDGAFETSGTFETRGTVKN-QWQISLSQADIHGELAGFPVTLTGDVTVNEK 548
             G+   K   D   +  G   TRG++    WQI +   D+ G +    V   G+V  N  
Sbjct: 466  -GINTAKQYPDWPAKLQGKITTRGSLYGGTWQIQVPVLDLTGNVKQNAVKAQGNVRGNSY 524

Query: 549  LHLSAQDFLLTAMGAKLTLNGNVEDDWDLQGLILAPDLSLLAEGLNGKFMANLDVSGSNK 608
                     L      L + G + D W+L   + AP L     GL G     L + G  K
Sbjct: 525  GQWDIPQLHLELGRNNLDVKGTLADTWNLDAKVDAPHLDGALPGLGGVVKGMLQLRGDLK 584

Query: 609  DPLVNLQAQGEAIKFGTTQLESLAIKGLYQPFAKHEFALSLKGSALQLGSRKLESVTLGA 668
             P +        +K+    +  + IKG      + +   S++   L+  +  +  + L A
Sbjct: 585  APKLLADITATGLKWQALTVRRVDIKGDVSSTDQIQGNFSVRVQQLKQDALDITDINLEA 644

Query: 669  KGDINKQKLRAESFGD-IRLDTVVESQFDEKTQLIEASVTRFDLGSEFGDWGLSQDLHLT 727
            KG+  K +L  +  G  +     +   FD  T+  + ++T     +  G W L++ + L 
Sbjct: 645  KGNEKKHELTLKVDGKPVSGRLALSGSFDRATEEWKGNITNTLFDTPVGQWRLNRSIALD 704

Query: 728  WELASNSGTLNEACFTQGNNALCLPRPATLGSTGDVAISFRGEPGAIIDKLLPTNMDWKG 787
            +       T+   C+   N  LC+P+    G++G  ++       A+I   L  +    G
Sbjct: 705  YFNKEQRITVGPHCWQNPNADLCVPKTIDAGASGQASVVLNRFDLAMIKPFLTDDTQLSG 764

Query: 788  KASLDAAVDWSPKRK-PAGELSLVFEPGSVTLLRPKGKVVEVGFEALSAKASLSPETLTA 846
              S  A V W  +   P   +SLV +   V  L  +G  + V F+ L+  A L+    + 
Sbjct: 765  VFSGKADVSWKAEGGLPQASVSLVGKGVKVQQL-VQGSPLPVAFDTLNLNAGLNNGRASL 823

Query: 847  DLNLRSSRLATLDSRVEIAVTPD-RALGGYIHLDRIQLEALREFLPQLDTLQGEISSELT 905
            D  ++ +    LD  ++IA     R L G +++ RI +  L+  L   +   G +++ L 
Sbjct: 824  DWLIKITHNGQLDGSIQIADPQGKRNLSGNVNIARISMALLQPALMDGEKASGILNANLR 883

Query: 906  LAGTLMSPEVSGNLALANGAFSASANPTLISDVDMLLAFAGQQASLNGSWVMGDGKGGIE 965
            L G    P V G LAL    F A   P  I+D ++ + F G  + + G      G+  + 
Sbjct: 884  LGGNAQKPLVFGRLALTGVDFDAQFMPFDITDANIGINFNGMSSIMEGVIKTAQGQIELN 943

Query: 966  GSLAWPD-GQFSGELAVKGDKLAVIVPPMALLDVSPDVTLTFDAAMLDLKGSVNIPTGNI 1024
            G+  W +   +   +A +G+K+ V VPPM  LDVSPD+       +  L G+V+IP   I
Sbjct: 944  GNADWSEINAWRARIAARGNKVRVSVPPMVRLDVSPDLVFDATPQLFSLNGTVDIPWARI 1003

Query: 1025 KIVQLAEGGVAVSPD-VVFDDSIAEAEQKTSPYGVTADLNIRVGDQVKIEGMGLKGRLDG 1083
             + +L E  V VS D V+ +D        ++   + ++L + +G  V+++  GLK RL+G
Sbjct: 1004 TVQELPESAVGVSSDEVMLNDQRQPIAPASASIPINSNLMVNIGKDVRLDAFGLKARLEG 1063

Query: 1084 TLRLQQQAFKPPLLFGDVKVLSGSYKFMGQTLKIPKGEVQFVGPPQLPNLNIEAIR--EI 1141
             L++ Q + +   L G + + SG +   GQ L + KG++ F GP   P LN+EAIR  + 
Sbjct: 1064 ALKVAQDS-RGLGLNGQINIPSGRFHAYGQDLIVRKGQLLFSGPADQPLLNLEAIRNPDA 1122

Query: 1142 KDEDLIAGVRITGTGMAPEVTLFSNPSKEQAEILSYILKGKGFASNGSGDNNALMMGAAL 1201
             + D++AG+R+TG   AP++ +FS+P+  Q E LSY+L+G+G   N  GD+ A M  A +
Sbjct: 1123 TENDVVAGLRVTGEADAPKLEIFSDPAMSQQEALSYLLRGQGL-DNSGGDSGA-MTSALI 1180

Query: 1202 SLSSSLSGGAIGNIGSTATSLVEKFGFSNVQLDT---NDEGRVAISGYIGENLMVKYGVG 1258
             L  + SG  +G IG       E FG SN+ LDT    D  +V +SGY+   L VKYGVG
Sbjct: 1181 GLGVAQSGKLVGKIG-------EAFGVSNLALDTQGVGDSSQVVVSGYVLPGLQVKYGVG 1233

Query: 1259 VFNPGYEMTVRYYLLSQLYLETVSGTVGQSLDIYYSFD 1296
            +F+    +T+RY L+ +LYL+ VSG + Q+LD+ Y F+
Sbjct: 1234 IFDSLATLTLRYRLMPKLYLQAVSG-IDQALDLLYQFE 1270