Pairwise Alignments

Query, 1297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1299 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 1058 bits (2736), Expect = 0.0
 Identities = 552/1272 (43%), Positives = 795/1272 (62%), Gaps = 28/1272 (2%)

Query: 39   VTRLVVYIPLLFLVLLALVLGTPFGARIAVSLAASLVPNFSASYVSGTINRDLALSDIRW 98
            + R+++Y+PL  L+LLA+++GTPFG+RIAV+LA  LVP+ S SY  GT+N  L L   +W
Sbjct: 42   LVRVLLYLPLALLILLAILIGTPFGSRIAVNLADLLVPDLSLSYGGGTLNGQLQLEHAKW 101

Query: 99   SMDGIAVEGKALLVEWQPSCLLAKGLCVQNLSLDGLALVIETDKLPKGESEPAPATEK-- 156
             M GI VE + L + W+P CLL + +CV +L  D + + I+TD L    S  A   EK  
Sbjct: 102  QMTGIEVETEGLSLNWRPLCLLQRQVCVDSLGADAVRVDIDTDLLT-ASSPDAALKEKAA 160

Query: 157  ---------LILPFSISLDKAQLTSVDVRVDTMKFGADYLMAAAKWQEDGLKVDELQSRG 207
                     L LP  I L+++ L  + VRV+ M+F A+ L A A W E GL+V+ L S G
Sbjct: 161  IDETSEHGPLTLPIGIILNQSDLNQIRVRVNEMQFNAEQLAAKASWLETGLRVNRLDSSG 220

Query: 208  LQVFIPIPGEADTGAQGSTITSDNTAMDSAAPTEGSWPLASLPTIALPMNLQLLKADLTD 267
            L V IP+ G+++ G Q   I + N   D+ A    SWPL+ LP + +PM + +  A L D
Sbjct: 221  LLVSIPL-GQSEDGTQ--PIQAKNDRQDAQA----SWPLSQLPEVEIPMPIFVDGAHLVD 273

Query: 268  THLAILGEDEVISRLLLGADFEGSALTLQELKLEHPEAELELKGTVDLSADYPMALKLNV 327
            + L +    +  + + L   + G  +T+  L   H   +  L G + L+ DYPMAL L  
Sbjct: 274  SELRLGERIDKFAAIDLAGSYLGYKITVDSLAFSHDYGKARLDGEMSLTQDYPMALHLEA 333

Query: 328  --NTHSPSRFPDIGEQQLQLDVNGNLSQLTLKVQAKGTLNFELDAGAALTNPEVPFTLTL 385
              N +  S  P++  Q+L  ++NG  S L +K++ +G L  +LDA   L+ P +P+ +TL
Sbjct: 334  EFNANKISELPELKNQRLNAEINGGFSALAVKLKGEGHLELDLDAKGNLSTPAMPYEMTL 393

Query: 386  SKANVGWPLQAPEYQGQELSVVASGNLNAQQASINGNVITPFHTPLLLNAVLSHQAQSLE 445
            S  ++ WPL   +Y+ + L++ +SG+L +Q   + G + TP+H  L LN  L+HQ Q++E
Sbjct: 394  SSRHLMWPLAQAQYEAKALTLESSGSLASQSLKLTGELKTPYHPWLSLNTQLTHQDQNVE 453

Query: 446  ITEAAVSGEPGNIHLSGTLNYADGLDWRAGVSFDKLTPSALVLPEGVTLPKGSLDGAFET 505
            +   +V  E G + L G L Y + + W+       L  + L +     LP+  + G+  +
Sbjct: 454  VAALSVDSEMGKLDLKGKLGYGEAISWQLEADTQDLDLAQLDVMPDKPLPETQISGSLHS 513

Query: 506  SGTFETRGTVKNQWQISLSQADIHGELAGFPVTLTGDVTVNEKLHLSAQDFLLTAMGAKL 565
             G F  +     QW + +SQAD+ G++  +P+ L GD+++N+K  L+A+   L A+ ++L
Sbjct: 514  QGRFSDK-----QWSVGISQADLQGQVDQYPLRLQGDISLNDKFQLNAEHLQLDALESQL 568

Query: 566  TLNGNVEDDWDLQGLILAPDLSLLAEGLNGKFMANLDVSGSNKDPLVNLQAQGEAIKFGT 625
            TL+G V+D W L G +  P LSL     +G   A ++VSG ++ P V + A     K+  
Sbjct: 569  TLSGRVDDAWALDGQLSVPALSLWDPSASGAIKAVINVSGDDEHPEVAINADTIEFKYAD 628

Query: 626  TQLESLAIKGLYQPFAKHEFALSLKGSALQLGSRKLESVTLGAKGDINKQKLRAESFGDI 685
              ++   +   Y+P   H+FALSLK S ++     L  +TLG KGDI KQKL  +++GD+
Sbjct: 629  ITVDKAKLIAFYRPQDAHQFALSLKSSGIKGQGMALSDLTLGFKGDIAKQKLGLQTYGDL 688

Query: 686  RLDTVVESQFDEKTQLIEASVTRFDLGSEFGDWGLSQDLHLTWELASNSGTLNEACFTQG 745
            +L+T + S FDEKTQ  +A + R  L S  G   L +   L W+     G ++  C+   
Sbjct: 689  QLNTSIASTFDEKTQRFDAKIKRISLNSRLGAMALDEPFDLYWDNKHAKGEISPFCWRHD 748

Query: 746  NNALCLPRPATLGSTGDVAISFRGEPGAIIDKLLPTNMDWKGKASLDAAVDWSPKRKPAG 805
              +LCL   A LG  GD  + F G+ GA++  +LP N+ W+G   LD  + W+   KP G
Sbjct: 749  AASLCLTDTAELGDKGDTRLQFAGDLGALLAPVLPENLKWRGPTQLDGELQWAKGAKPTG 808

Query: 806  ELSLVFEPGSVTLLRPKGKVVEVGFEALSAKASLSPETLTADLNLRSSRLATLDSRVEIA 865
            +L+L   PG   L   K + +E  +  L+  A L    L  D  L S R A +DS++ I+
Sbjct: 809  QLTLAMAPGQFDLTTTK-RHIEAQYHYLNLTARLDELQLAIDTQLESERFAKIDSQLTIS 867

Query: 866  VTPDRALGGYIHLDRIQLEALREFLPQLDTLQGEISSELTLAGTLMSPEVSGNLALANGA 925
              P+  L G I L  I L AL +F PQL+ L G++SS + L GTL  P++SG + L +G 
Sbjct: 868  TDPEHRLSGKIDLKDIDLHALADFTPQLEVLDGKVSSAIILGGTLNEPDLSGTVDLNDGQ 927

Query: 926  FSASANPTLISDVDMLLAFAGQQASLNGSWVMGDGKGGIEGSLAWPDGQFSGELAVKGDK 985
             +A+ANPTL+ ++ + L   GQ   + G W MGDGK  ++G + W +G   G+L   GDK
Sbjct: 928  LAAAANPTLLDNIKLKLTLLGQTGQVKGQWTMGDGKAKVDGVIGWQEG-LKGDLNFSGDK 986

Query: 986  LAVIVPPMALLDVSPDVTLTFDAAMLDLKGSVNIPTGNIKIVQLAEGGVAVSPDVVFDDS 1045
            LA+I PP+A+LDVSPD+ ++F    LD++G +++P+G+IKIVQL EGGVA S DVVF+DS
Sbjct: 987  LAIIQPPLAILDVSPDLDISFSDKHLDIRGKLDVPSGHIKIVQLPEGGVAESSDVVFNDS 1046

Query: 1046 IAEAEQKTSPYGVTADLNIRVGDQVKIEGMGLKGRLDGTLRLQQQAFKPPLLFGDVKVLS 1105
            +A   Q   P  VT+ + ++VGD++ I+GMGL+G L GTL L+Q AFKPPLL+GD+KV++
Sbjct: 1047 LASQAQVKDPIAVTSQIAVKVGDKLTIDGMGLRGMLVGTLELRQAAFKPPLLYGDIKVVN 1106

Query: 1106 GSYKFMGQTLKIPKGEVQFVGPPQLPNLNIEAIREIKDEDLIAGVRITGTGMAPEVTLFS 1165
            G+YKFMGQTL I  GEVQF+GP  +PNLNIEAIREIKDED++AGVRITGT + P VTLFS
Sbjct: 1107 GNYKFMGQTLSIKAGEVQFIGPMAVPNLNIEAIREIKDEDVVAGVRITGTPLKPVVTLFS 1166

Query: 1166 NPSKEQAEILSYILKGKGFASNGSGDNNALMMGAALSLSSSLSGGAIGNIGSTATSLVEK 1225
            NP+KEQAEILSYI+KG G  ++ S  NNALMMGAAL+L + L   A  N+GS+A+ ++EK
Sbjct: 1167 NPAKEQAEILSYIIKGTGLNNSSSDQNNALMMGAALTLGNQLGDNAFSNLGSSASGIIEK 1226

Query: 1226 FGFSNVQLDTNDEGRVAISGYIGENLMVKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTV 1285
            FG SNVQ D NDEG+VAISG+IGE+LMVKYGVGVFNPGYEMTVRYYL+SQLYLE+VSGT+
Sbjct: 1227 FGISNVQFDANDEGKVAISGFIGEDLMVKYGVGVFNPGYEMTVRYYLMSQLYLESVSGTI 1286

Query: 1286 GQSLDIYYSFDL 1297
             ++LDIYY+FD+
Sbjct: 1287 SKTLDIYYNFDI 1298