Pairwise Alignments

Query, 708 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 418 a.a., DNA methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  218 bits (554), Expect = 6e-61
 Identities = 138/406 (33%), Positives = 203/406 (50%), Gaps = 28/406 (6%)

Query: 2   FNFFAAAPKGFEYALAKELETLG-----AENVR---ESVAGVYFSASLAQGYQITLWTRL 53
           +++F   P+G E ALA+EL  +      A N++   +   GV+ S +L   YQ+ L +R+
Sbjct: 8   YSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHSRI 67

Query: 54  ASRIVLILFTGECQSAEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIK 113
           ASR++L +  G  ++   +Y+      W   F    T  +D       + + +F  LKIK
Sbjct: 68  ASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLKIK 127

Query: 114 DAVVDRFRDDDLSRPDVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPL 173
           DA+ DRF D    RP V    PDMRI         T+ ++ SG AL +RG+R  TG+APL
Sbjct: 128 DAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDAPL 187

Query: 174 KENLAANMLYRSGWADNPVTLLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHD 233
           +ENLAA +L  +GW    V L DP CGSGT+L EAA +   + PG  R RF FE +   D
Sbjct: 188 RENLAAGLLRTAGWKPG-VPLFDPMCGSGTILAEAAQIIAGVPPG-ARRRFAFEKFSNFD 245

Query: 234 QALWQQVIEEAKARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANAL 293
              W  +  + K              +GSDI   +V L ++N   AGV   +  K   A 
Sbjct: 246 ADAWFAIKGDFKP----NPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQ 301

Query: 294 NLEPPV-AE-----GMVLTNPPYGERLG--------NVTSLLQLYFQLGEKFKQSYGGWK 339
            ++PPV AE     G++L+NPPYGER+G              Q +       KQ + GW 
Sbjct: 302 EIKPPVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFAGWS 361

Query: 340 LGLLCSDMELVSSLKLKADKQMKMYNGALECAFNLYTLHATSTRRD 385
           + L  +D+ L   ++LK  ++   +NGALEC    + + A   RR+
Sbjct: 362 VFLFSADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRRE 407