Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 308 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N1B4

 Score =  181 bits (459), Expect = 2e-50
 Identities = 103/273 (37%), Positives = 154/273 (56%), Gaps = 1/273 (0%)

Query: 1   MKYTLKQMSVFDAVASLESVSGAARKLSMTQSAVSMSLQQLESLLGRPLFIRQGNRLMLS 60
           M++TL+Q+ VF AVA  ESVS AA  L+++QSA S S+ +LE      LF R G RL L+
Sbjct: 1   MRFTLRQLQVFVAVAQQESVSRAALTLNLSQSAASTSITELERQCSCQLFDRAGKRLSLN 60

Query: 61  HWGHWLRPRARKLLADAQQIAMGLHDQHLLSGSLSMGASQTAAEHLLGDLISRLDSDFPQ 120
             G  L P+A  LL  A++I   L+ +    GSL++GA+ T   +L   LI       P+
Sbjct: 61  ALGKQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGSFMQRHPE 119

Query: 121 IHIELMVENTENVITAVQEYEVDFGIIEGRSDDAHLVLEPWLDDHLVVIAAPHHPYGKYG 180
             ++L V+NT N++  V  YE+D G+IEG      + ++ W++D LVV  AP HP  K G
Sbjct: 120 SQVKLHVQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRG 179

Query: 181 NVSLSQLEQAKWVLREQGAGTRRIFDAAIHGNLDRLNVWREYEQVPVLKALVKNGPYLSA 240
             ++ +L    W+LREQG+GTR  FD A+  +   LN+  E E    +K  V++G  +  
Sbjct: 180 IATMEELSHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGC 239

Query: 241 LPYLDVERDVAAGQLIILSTPKLNMKRQLSFVW 273
           +  L +      G L+ + TP L++ RQ  F+W
Sbjct: 240 ISRLALRDAFRRGSLVPVETPDLDLARQFYFIW 272