Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 313 a.a., LysR family transcriptional regulator PA5437 from Pseudomonas fluorescens FW300-N1B4

 Score =  110 bits (275), Expect = 4e-29
 Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 2/270 (0%)

Query: 4   TLKQMSVFDAVASLESVSGAARKLSMTQSAVSMSLQQLESLLGRPLFIRQGNRLMLSHWG 63
           TL+Q+ +F+ V  L S S AA ++S+TQ AVS+ ++QLE L+G+PLF   G +L ++   
Sbjct: 2   TLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMTEAA 61

Query: 64  HWLRPRARKLLADAQQIAMGLHD-QHLLSGSLSMGASQTAAEHLLGDLISRLDSDFPQIH 122
             L+  +R +    + + M L D Q  L G L + A +++A++ +  L +      P+++
Sbjct: 62  EALQRASRDIFGRLENLDMQLSDMQGSLQGQLKL-AVESSAKYFVPHLFAAFKRQHPEVN 120

Query: 123 IELMVENTENVITAVQEYEVDFGIIEGRSDDAHLVLEPWLDDHLVVIAAPHHPYGKYGNV 182
           + L V N   VI  + +   D  I+     D  L   P+L++ +V +A P HP    G +
Sbjct: 121 LHLTVVNRGQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVAPPDHPLCHMGPL 180

Query: 183 SLSQLEQAKWVLREQGAGTRRIFDAAIHGNLDRLNVWREYEQVPVLKALVKNGPYLSALP 242
            L  LE    +LRE G+GTR   +             +E       +  V  G  ++ L 
Sbjct: 181 RLQDLEPYTLLLREHGSGTRLACEEYFKEKRVHFTQTQEVASAEAQRECVLAGLGVALLT 240

Query: 243 YLDVERDVAAGQLIILSTPKLNMKRQLSFV 272
              +  ++A G LI L   +L + R    V
Sbjct: 241 RHALNLELATGGLIELPVEELPLYRSWCLV 270