Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 290 a.a., LysR family transcriptional regulator from Rahnella sp. WP5

 Score =  160 bits (406), Expect = 3e-44
 Identities = 102/274 (37%), Positives = 151/274 (55%), Gaps = 8/274 (2%)

Query: 1   MKYTLKQMSVFDAVASLESVSGAARKLSMTQSAVSMSLQQLESLLGRPLFIRQGNRLMLS 60
           M  TL+Q+ VF  V    S + A+  LS++QSAVS +L  +E  LG  LF R G RL+++
Sbjct: 1   MHITLRQLEVFAEVLKSGSTTQASVVLSLSQSAVSAALADIEGQLGVQLFDRVGKRLVIN 60

Query: 61  HWGHWLRPRARKLLADAQQIA-MGLHDQHLLSGSLSMGASQTAAEHLLGDLISRLDSDFP 119
             G  L P+A  LL  A +I  +  HD    +GSL +GAS T   ++L  +I+    DFP
Sbjct: 61  EHGRLLYPKALALLEQAGEIERLFNHD----NGSLRIGASSTIGNYMLPAMIADYRLDFP 116

Query: 120 QIHIELMVENTENVITAVQEYEVDFGIIEGRSDDAHLVLEPWLDDHLVVIAAPHHPY-GK 178
              +EL V NT +VI AV ++ VD G+IEG      L+ +PWLDD LVV  AP +P  G+
Sbjct: 117 NTPLELNVGNTNDVINAVADFRVDLGLIEGPCQMPELITQPWLDDELVVFVAPENPLAGR 176

Query: 179 YGNVSLSQLEQAKWVLREQGAGTRRIFDAAIHGNLDRLNVWREYEQVPVLKALVKNGPYL 238
              VSL  L +  W+LRE+G+GTR + D  +   L   N+  E      +K  V++G  +
Sbjct: 177 V--VSLESLAREPWILRERGSGTREVLDHLLLPQLPDFNLVMELGNSEAIKHAVRHGIGI 234

Query: 239 SALPYLDVERDVAAGQLIILSTPKLNMKRQLSFV 272
           S L    +   +++G L+ +  P   + R+L  +
Sbjct: 235 SCLSRRVISEQLSSGSLVEIRLPVAPLVRKLYLI 268