Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 346 a.a., Permease from Xanthomonas campestris pv. campestris strain 8004

 Score =  100 bits (250), Expect = 4e-26
 Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 31/334 (9%)

Query: 13  RGFAIMAFVVVILAG----IKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVML 68
           R F +   +V+ L      + A S +++    +  +AV+   + SW+ R+        + 
Sbjct: 7   RAFVVRVVIVLALVAYAWLLWALSGLLLMVFGAVVVAVLLRALASWVTRYTPLSDGMALG 66

Query: 69  LMFFIVMLG----LWL-----ATLVGSSINEFSKQLPHYRDQLIQ-QFGWILEKL-QTLN 117
           L+  +V +G    LWL     AT +G+      +    + D +     G  LE+L +   
Sbjct: 67  LVVVVVAVGFTALLWLFGSQLATELGALQRTLPQAWARFHDWVAAGPLGPALEELTRQAP 126

Query: 118 IRISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKVHLAL 177
            R+S    LA      ALS+T  +        ANLFL++   V++  + Q   + V L L
Sbjct: 127 ARVSN---LAPRAGAFALSITGGV--------ANLFLVLAGAVYLAAQPQLYRRGV-LLL 174

Query: 178 DDPEMRLQQIDKFLHS---VNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAFLF 234
              ++R    D    S   +  ++  + L  +  GA+ G+GL A+G+  AL   +IA L 
Sbjct: 175 FPVQVRATMDDAVRASGTALRLWLRGQLLAMVVVGALTGLGLWALGIPGALALGIIAGLL 234

Query: 235 NYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVMGNVIEPKFMGRGLGLSTL 294
           +++P +G I+AAIPAILL F  + P  A  TA L++    + GN++ P    R + L  +
Sbjct: 235 DFVPIVGPILAAIPAILLGFT-VSPQMALATAALFVVVQQIEGNILLPLIQQRTVDLPPV 293

Query: 295 VVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALER 328
           ++  SL   G LLG  G+LL+ PLT++  + ++R
Sbjct: 294 LLLFSLFGIGTLLGPAGVLLAAPLTVVAFVLVKR 327