Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 434 a.a., Protein of unknown function UPF0118 (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (287), Expect = 3e-30
 Identities = 83/340 (24%), Positives = 167/340 (49%), Gaps = 22/340 (6%)

Query: 2   PNPFEQTSVAFRGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVP 61
           P    Q     R      F +++L  +     +++P VL+  +A++ +P++  + R +VP
Sbjct: 71  PLTLRQQLTTVRWLLTGLFAMMLLVFLYFGRDVLMPIVLALLLALMLSPIVRLLRRRKVP 130

Query: 62  KWLAVMLLMFF----IVMLGLWLATLVGSSINE---FSKQLPHYRDQLIQQFGWILE--- 111
           + +A +++       ++++G  ++  V + + +     K++ H    L + F  +L+   
Sbjct: 131 EGVAAVVVTLGFAAGMLLIGFTISGPVATWLEDAPSIGKRIAHKLSSLRESFDVVLDASR 190

Query: 112 KLQTLNIRISKEQV--LAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSL 169
           +++      SK+    +    PG+ +    ++ SG          I++T+ F+   +   
Sbjct: 191 QVEEAADTSSKDNTDRVVMAQPGLLVKAADSLASGFTTFGVT---IVITLFFLASGSMFT 247

Query: 170 PKKVH-LALDDPEMRLQQIDKFLHS-VNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLW 227
            K VH + L   ++R+ ++ + + + V+ Y++   +++   G  VG  L   G+  A LW
Sbjct: 248 EKIVHVMPLFRDKLRVLRVVRDIETEVSSYLLTVAMINAGLGVAVGCALWLAGMPNAFLW 307

Query: 228 AVIAFLFNYIPNIGSIIAAIPAILLAFI---QLGPAAAGGTALLYLGTNMVMGNVIEPKF 284
             +A + N++P IGS+I      L++F+    LG A      L YL    V G  + P  
Sbjct: 308 GGMAMVLNFLPYIGSMIGISLVALVSFVTFDSLGQALI--PPLSYLAVTSVEGQFLTPAI 365

Query: 285 MGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKI 324
           +GR L L+ L V L+++FW WL G VG L++VPL ++VK+
Sbjct: 366 VGRRLELNALSVMLAVLFWAWLWGIVGALIAVPLLVVVKV 405