Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 652 a.a., AI-2E family transporter from Rhodopseudomonas palustris CGA009

 Score =  110 bits (275), Expect = 1e-28
 Identities = 82/366 (22%), Positives = 168/366 (45%), Gaps = 42/366 (11%)

Query: 16  AIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFFIVM 75
           A+    V+I++ +     + VP  L+  ++ +    ++++   RVP+ +A +  + F   
Sbjct: 20  AVTILAVIIISALYVGREVFVPVALAILLSFVLARPVNFLQSLRVPRAIAAISTVLFAFA 79

Query: 76  LGLWLATLVGSSINEFSKQLPHYRDQLIQQF---------GWILEKLQTLNIRISKE--- 123
           +   L +L+ + ++  +  LP Y+  +  +             LE+ + +   +SKE   
Sbjct: 80  VIFALGSLIATQLSRLADDLPQYQSTIQSKITSLRGVTGGSTTLERAEGMLQNLSKELNK 139

Query: 124 -------------------------QVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILT 158
                                    +VL   DPG  L+   ++++ + + +A   +I++ 
Sbjct: 140 PKNAPAPSLSNPPTSSSRPVTPVPVEVLQP-DPG-TLANLRSLIAPLISPLATTGIIVIF 197

Query: 159 IVFMLFEAQSLPKK-VHLA-LDDPEMRLQQIDKFLHSVNQYMVIKTLVSLATGAVVGIGL 216
           ++F+L + + L  + + LA   D +     +D     +++  + + L++   G ++G GL
Sbjct: 198 VIFILLQREDLRNRLIRLAGTRDLQRTTAALDDAASRLSRLFLNQLLINSGFGVLIGTGL 257

Query: 217 AAIGVDYALLWAVIAFLFNYIPNIGSII-AAIPAILLAFIQLGPAAAGGTALLYLGTNMV 275
             IGV    LW ++A +  ++P IGSII AA P  L   +  G +    TA+L+      
Sbjct: 258 WIIGVPSPALWGILAAVLRFVPYIGSIISAAFPLTLAVAVDPGWSMLVWTAILFFVIEPA 317

Query: 276 MGNVIEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALERSSSGRWL 335
           + +V+EP   GR  GLS + V +S  FW  L G +G++L+ PLT+ + +         +L
Sbjct: 318 IAHVVEPMVYGRSTGLSPVAVVISATFWTALWGPIGLVLATPLTVCLVVLGRHVERLAFL 377

Query: 336 AILLAD 341
            ++  D
Sbjct: 378 DVMFGD 383