Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 382 a.a., AI-2E family transporter from Parabacteroides merdae CL09T00C40

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 81/350 (23%), Positives = 174/350 (49%), Gaps = 40/350 (11%)

Query: 2   PNPFEQTSVAFRGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWM-----M 56
           P  F++ +    G A+++ ++ ++A ++ A   ++PF+++  +A +  P + +      +
Sbjct: 8   PFTFDRVARILFGLAVISGIIYLIAVLRNA---LLPFLIAWLLAYMMQPFVKFFQYKVKL 64

Query: 57  RFRVPKWLAVMLLMFFIVMLGLWLATLVGSSINEFSKQLPHYRDQ---------LIQQFG 107
           + R+   LAV  L+  ++++ L    +V S   EF++ L   ++          + Q + 
Sbjct: 65  KSRLLSILAV--LVSTLLVISLVGVVIVPSVTQEFNRTLELMQEHNSGYGHIPMIPQSWA 122

Query: 108 WILEK------LQTLNIRISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVF 161
             LEK      L  L  + + E+ +    P M + +T N  S + ++   +F+I L  +F
Sbjct: 123 EYLEKNIDPDQLAQLLSKENIEKAVKQIAPKMWIVLT-NTFSILFSITI-VFVIFLYFIF 180

Query: 162 MLFEAQSLPKK-VHLALDDPEMRLQQI-DKFLHSVNQYMVIKTLVSLATGAVVGIGLAAI 219
           +L + + +    + L  +     +Q + D   +S+N+Y   ++L++L  G +  IG   +
Sbjct: 181 ILLDYERIVNGWIRLIPERYRPFVQGLADDVEYSMNRYFRGQSLIALCVGILFAIGFKIV 240

Query: 220 GVDYALLWAVIAFLFNYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVMGNV 279
           G   A++  +     N IP + +I   IP ILL+ ++   A  G    L  G+ +++  +
Sbjct: 241 GFPLAVILGLFIGFLNLIPYMQTI-GIIPMILLSLLKA--AETGENFWLIFGSGILVLCI 297

Query: 280 IE--------PKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMI 321
           ++        P+ MG+ +GL+  ++ LSL  WG LLG +G+++++PLT +
Sbjct: 298 VQCIQDLYLTPRIMGKAMGLNPAIILLSLSIWGTLLGFIGLIIALPLTTL 347