Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 374 a.a., AI-2E family transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 73/336 (21%), Positives = 154/336 (45%), Gaps = 16/336 (4%)

Query: 17  IMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFFIVML 76
           +MA V V++ G      I++P +++ FI+++  PV  ++ R R+P+ LA++L +  + + 
Sbjct: 18  LMAIVAVMVIG----RDIIMPMLMAFFISIMLLPVYRFLKRKRIPESLAIILSILLVALF 73

Query: 77  GLWLATLVGSSINEFSKQLPHYRDQLIQQFGWILEKLQTLNIRISKEQ-VLAYFDPGMAL 135
              +     + I    K  P  +  + Q    + + +  +     K+Q           +
Sbjct: 74  VALIVWFFSNQIGILVKDFPQIKSNVTQHINSLSDWISRITHYDDKQQKAFIQTKSDDLM 133

Query: 136 SMTTNMLSGVGNVMANLFLII----LTIVFMLFEAQSLPKKVHL--ALDDPEMRLQQIDK 189
           +M T++  G    ++ +F+ I    + I  MLF    L + + +    DD     + I +
Sbjct: 134 NMGTSLAGGAAVTLSGIFVFIGLLPIYIYLMLFYKDILLRFIFMWFKTDDHPKVKEAIYE 193

Query: 190 FLHSVNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAFLFNYIPNIGSIIAAIPA 249
               +  Y++   +       ++G  L  IG+ +ALL  VI  + N IP +G++I  +  
Sbjct: 194 TESIIKSYLIGLLIQITYMTILLGGILMLIGIKHALLIGVIFAILNLIPYVGALIGNLIG 253

Query: 250 ILLAFI---QLGPAAAGGTALLYLGTNMVMGNVIEPKFMGRGLGLSTLVVFLSLIFWGWL 306
           +LL      +L P       + ++    +  N++ P+ +G  + ++ L   L +   G +
Sbjct: 254 VLLTLTSSQELWPVITVLGVIAFV--QFLDNNILMPRIVGSKVKINALFAILGVFIGGSI 311

Query: 307 LGSVGMLLSVPLTMIVKIALERSSSGRWLAILLADD 342
            G  GM L++P+  ++KI  +R+ S +   +LL D+
Sbjct: 312 AGVSGMFLALPIVAVLKIIFDRTESFKQWGVLLGDE 347