Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 356 a.a., AI-2E family transporter from Ralstonia sp. UNC404CL21Col

 Score =  116 bits (290), Expect = 1e-30
 Identities = 91/337 (27%), Positives = 164/337 (48%), Gaps = 26/337 (7%)

Query: 13  RGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFF 72
           R  A +A  +V LA +KA +P + PFV +  ++ I +P + W+ R RVP+ L V L++  
Sbjct: 12  RTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRVPRVLGVFLMILV 71

Query: 73  IVMLGLWLATLVGSSINEFSKQLPHYRDQ----LIQQFGWILEKLQTLNIRIS------- 121
           + ++G+ L  L+   +    +++P  RDQ    L +   ++  KL  L + +S       
Sbjct: 72  LTVVGVALMLLI---LAVLQREIPAIRDQLPGMLAKLNAFLSPKLDELGLHVSFDFPGLR 128

Query: 122 ---KEQVLAYFDPGMALSMTTNMLSGVG--NVMANLFLIILTIVFMLFEAQSLPKKVHLA 176
               EQ+ A  D  +A  +T   +SG     V+   FL+ + + ++L +   L +++  A
Sbjct: 129 ALLTEQLAASPDDVVARVLTYLRVSGSAAIQVLGIFFLVPIVMFYLLMDWNMLMRRIETA 188

Query: 177 LDDPEMRLQQIDKFLHS----VNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAF 232
           +  P   L +  +        ++QY+  + +V L        GLA  G D AL   +   
Sbjct: 189 V--PRRWLAKTRELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDVALPVGIFTG 246

Query: 233 LFNYIPNIGSIIAAIPAILLAFIQLGPA-AAGGTALLYLGTNMVMGNVIEPKFMGRGLGL 291
           L  +IP IG  +    AIL A +Q G        A++Y     + G  + P+ +G  +GL
Sbjct: 247 LAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTPRLVGERIGL 306

Query: 292 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALER 328
             L V L+L+ +G L G  G+LL++P++ ++ + L +
Sbjct: 307 HPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343