Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 650 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  128 bits (321), Expect = 5e-34
 Identities = 93/365 (25%), Positives = 170/365 (46%), Gaps = 34/365 (9%)

Query: 11  AFRGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLM 70
           +  G A +   VV++ G+     +++P  LS  ++ +  P++  + RF + +  ++ + +
Sbjct: 21  SLHGLASVITGVVVVCGLYFGRAVLIPITLSVLLSFLLAPLVQMLRRFHMGQLPSIFIAV 80

Query: 71  FFIVMLGLWLATLVGSSINEFSKQLPHYRDQLIQQFGWILEK---------------LQT 115
            F +   L +  L+ + + + +  LP Y++ + Q+   + EK               LQ 
Sbjct: 81  LFALASLLAVGALITAQLVQLAADLPQYQEAIEQKIETVQEKTVGRADSLMSRAAVALQR 140

Query: 116 L----------------NIRISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTI 159
           +                N     + V  +      + +    LS     +   F++++  
Sbjct: 141 VSPPKPNPPRPTGRAARNAPAVPQPVEVHEPAPTPMQLAQRALSPAIAPIETTFIVLVVT 200

Query: 160 VFMLFEAQSLPKKVHLALDDPEMR--LQQIDKFLHSVNQYMVIKTLVSLATGAVVGIGLA 217
           +F+L + + L  ++       ++      I+     +++Y V +  V+L+ G V+ IGLA
Sbjct: 201 IFILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLA 260

Query: 218 AIGVDYALLWAVIAFLFNYIPNIGSIIAAIPAILLAF-IQLGPAAAGGTALLYLGTNMVM 276
            IGV  ALL+ VIA L  ++P IG  IAAI A+ LA  IQ     A  T +L++  ++V 
Sbjct: 261 IIGVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDVVA 320

Query: 277 GNVIEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALERSSSGRWLA 336
           G + EP   G   GLS L V ++ IFW WL G +G++LS PLT+ V      +    +L 
Sbjct: 321 GQIAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGRYADRLNFLT 380

Query: 337 ILLAD 341
           +LL D
Sbjct: 381 VLLGD 385