Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 677 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  101 bits (252), Expect = 5e-26
 Identities = 75/374 (20%), Positives = 163/374 (43%), Gaps = 40/374 (10%)

Query: 8   TSVAFRGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVM 67
           T+ +      +A  V ++A +  AS +++P  L+  ++ +  P+ + +MR R+    +V 
Sbjct: 21  TAFSLDSLISLAVGVTVVACLYFASAVLIPITLAILLSFLVAPLANALMRLRLGHVASVF 80

Query: 68  LLMFFIVMLGLWLATLVGSSINEFSKQLPHYRDQLIQQF------------------GWI 109
             +   V +   L  ++ + + + +  +P Y+  + Q+                   G  
Sbjct: 81  AAVVISVSVIGMLGAVIATQLTDLAAGMPRYQATIEQKMETAHSLTIGKLNRFASAAGQA 140

Query: 110 LEKLQTLNIRISKEQVLAYFDPGMALS-------------------MTTNMLSGVGNVMA 150
           L++      + + ++  A  D   + +                   +   +LS   + + 
Sbjct: 141 LQRATVEPPQPAPQRGPASRDSARSTASEPAAVPVEVREPVPTPFELARRVLSPAISPLE 200

Query: 151 NLFLIILTIVFMLFEAQSLPKKVHLALDDPEMRLQQ--IDKFLHSVNQYMVIKTLVSLAT 208
             F++ + +V +L +   L  +        ++      +D+    +++Y V +  ++   
Sbjct: 201 TAFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQLGLNAGV 260

Query: 209 GAVVGIGLAAIGVDYALLWAVIAFLFNYIPNIGSIIAA-IPAILLAFIQLGPAAAGGTAL 267
           G ++G GL  IGV   +LW ++A L   +P +G  I+A +   L A +  G   A  +  
Sbjct: 261 GVIIGTGLFMIGVPSPILWGILAALLRLVPYVGIWISATLATALAAAVSPGWTMAIWSLA 320

Query: 268 LYLGTNMVMGNVIEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 327
           L++   +++G ++EP   GR  GLS   V ++ IFW W+ G +G++LS PLT+ + +   
Sbjct: 321 LFVSVEVLVGQIVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGR 380

Query: 328 RSSSGRWLAILLAD 341
                 +L +LL D
Sbjct: 381 HVRRLEFLDVLLGD 394