Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit (RefSeq) from Shewanella amazonensis SB2B

Subject, 596 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) from Xanthomonas campestris pv. campestris strain 8004

 Score =  591 bits (1523), Expect = e-173
 Identities = 308/592 (52%), Positives = 393/592 (66%), Gaps = 7/592 (1%)

Query: 3   IPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNAHE 62
           I   ++D VV+GAGGAG+RA   ++++G     L+KVFPTRSHTV+AQGGI+ ALGN  E
Sbjct: 6   ITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAALGNMGE 65

Query: 63  DNWEYHMYDTVKGSDFIGDQDAIEYMCQTGPEAIIELEHMGLPFSRFENGKIYQRPFGGQ 122
           D+W YH YDT+KGSD++GDQDAIEYMC+    AIIELEH G+PFSR E GKIYQRPFGG 
Sbjct: 66  DDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQRPFGGM 125

Query: 123 SKNFG-GEQAARTAAAADRTGHALLHCLYQQNVKNKTQVFSEWYALDLVKNEDGAIVGCT 181
           +  +G G  A RT AAADRTGHA+LH LYQQ++ +  +   E++ALDL+ +E+G   G  
Sbjct: 126 TTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGVCRGVL 185

Query: 182 AIDIESGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAYRAGVQLQDMEMWQF 241
           A+D+  G +  F+A   VLATGG GR Y S T+AH  TGDG G+  RAG+ +QDME  QF
Sbjct: 186 ALDMAEGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPMQDMEFVQF 245

Query: 242 HPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREGR 301
           HPTGI GAG L+TEG RGEGG L N +GERFMERYAP+ KDLASRDVV+RSM  EIREGR
Sbjct: 246 HPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTIEIREGR 305

Query: 302 GCDGPMGPHIKLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVIPTCHYMMGGLP 361
           G  G    HI L L HLG E +  +LPG+ E +  FA +D A  PIPV+PT HY MGG+P
Sbjct: 306 GV-GEHKDHILLDLTHLGPEVINDKLPGIAESAHIFAGVDVAKQPIPVLPTVHYNMGGIP 364

Query: 362 TKVSGQVIRKNDDGSETDIVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLGK 421
           T   G+V+RK  D  +  + GL+A+GE ACVSVHGANRLG NSLLDLVVFGRA      +
Sbjct: 365 TNYHGEVVRKQGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVANRCAE 424

Query: 422 ALDETADPKAATDADIEQSLARLKRWESNKDGEDPAQIRKDLQMCMQLNFSVFRTGEAMA 481
            +      K       +++L  L +          + IR ++Q  MQ + +VFRT + + 
Sbjct: 425 TVKTNQPHKPLPSDACDKALGLLDKLRHANGSTPTSVIRDNMQRTMQSDAAVFRTSKTLK 484

Query: 482 EGLEQLQAIRKRLENAKLSDNSKEFNTQRIECLELDNLMATAIATAYAANFRTESRGAHS 541
           EG++++  I    E+ K+SD S  +N+  IE  EL+NL+  A+AT  +A  R ESRGAH+
Sbjct: 485 EGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESRGAHA 544

Query: 542 REDFTERDDDNWLCHSLF---DPVTEAMSKREVNM--SPKHREAFPPKKRTY 588
            EDF +RDD NW  H+L    D        R+V+M    K  +  PPK R Y
Sbjct: 545 HEDFPDRDDVNWQKHTLVTVDDKGQCDFEYRQVHMYTLSKEVDVVPPKPRVY 596