Pairwise Alignments

Query, 332 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 347 a.a., LacI family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  207 bits (528), Expect = 2e-58
 Identities = 114/332 (34%), Positives = 190/332 (57%), Gaps = 4/332 (1%)

Query: 1   MATIYDVSFLAGVSLATVSRVVNNTGKVSDKTRQKVHDAMAKLDYRPNTIAQSLASNRSN 60
           MAT+ DV+ LAGV ++T SR ++  G +S     +V  A+ +L++RP++I +++A+    
Sbjct: 1   MATLKDVAALAGVGMSTASRAISGKGPISADAAARVKAAIEQLNFRPSSIGRAMATQSLG 60

Query: 61  SIGVLVSQLDGPFYGPMMREVESALRAANKHVIIAAGHSDAAQEKDGVE---FLLSRGCD 117
            +G+ V    G +YG ++++ +  LRA  +HV++A G  + +  +  +E   FL+ R CD
Sbjct: 61  MVGIFVPTFFGSYYGTILKQTDEELRAVRRHVVVATGCGEVSPREQAIEAVRFLIGRDCD 120

Query: 118 ALIVDAEILSNGYLVELCQGKTPVVLINRHVDGIDERCVHLNNLQGGLLASRHVLEKGHK 177
            ++V +  L +  L+ L +    +V +NR  D + E     ++ +GG LA+R +L+ GH+
Sbjct: 121 GVVVISHDLHDEDLIMLHKMHPKMVFLNRAFDQLPEASFCADHHRGGELAARTLLDHGHR 180

Query: 178 QIAYISGPLFKLDARERLEGHRQALAEQGIAFDENLFYEGDFREEGGYEAMAQLLSRGRD 237
           +IA ISGP    D + RL+G    LA +GIA D+    E DF  EGGY A  +LL   R 
Sbjct: 181 EIAVISGPFTSSDNQMRLDGFFAELAREGIARDDVTLIESDFSPEGGYVAAQKLLGAKRR 240

Query: 238 FTAVVCANDQMASGAIAQCLERGLRVPEDISFVGFDNIPFPRYISPKLTTVCNPIQDMGR 297
           FT + CAND MA  A+A   + G+ VP ++S +G+D+     Y +P LT+V  P  ++ +
Sbjct: 241 FTGLFCANDTMAVSALACFHQAGISVPGEVSVIGYDDDYSAPYAAPGLTSVHIPTAELTQ 300

Query: 298 MAAHWVLREVYDQTDVTFCHRFEPELVVRDSV 329
            A  W++ + Y  T   F   F   + +R+SV
Sbjct: 301 NAVRWLINQCYRTTWEIF-REFPVSVTMRESV 331