Pairwise Alignments

Query, 385 a.a., butyryl-CoA dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

Subject, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score =  308 bits (790), Expect = 1e-88
 Identities = 166/373 (44%), Positives = 237/373 (63%), Gaps = 3/373 (0%)

Query: 6   NEDQRQFADLARQFAADELTPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEGGMGLS 65
           NEDQ   A++ARQFA + L PFA +W  EH +P + I +   LGF  +  PE  GG    
Sbjct: 4   NEDQNAIAEMARQFAQERLKPFAEQWSREHRYPAEAIGEMAALGFFGMLVPEQWGGSDTG 63

Query: 66  RLDASIIFEELSKGCTATTAMLTIHNMATWM-VTTWGTEAFRAEWSEALTTGAKLASYCL 124
            L  ++  EE++ G  A + ++++HN    + +  +G E  ++++   L  G ++ ++ L
Sbjct: 64  YLAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKSDFLTPLARGEQIGAFAL 123

Query: 125 TEPGAGSDAASLTTKAVREGDEYVINGSKMFI-SGAGATELLVVMCRTGEAGPKGISAIA 183
           TEP AGSDA+SL T+A R+GD YV+NG+K FI SG  A  ++V      +AG  GISA  
Sbjct: 124 TEPQAGSDASSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKGGISAFI 183

Query: 184 IPADAEGVIYGKAEDKMGWNAQPTRLITFENVRVPVQNLLGEEGQGFTFAMKGLDGGRIN 243
           +P D+ G    + EDK+G +A  T  I FE++RVPV N LGEEG+G+  A+  L+GGRI 
Sbjct: 184 VPTDSPGYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRLGEEGEGYRIALANLEGGRIG 243

Query: 244 IATCSVGTAQAALERSIAYMNERKQFGKPLAAFQALQFKLADMATELVAARQMVRLAAFK 303
           IA  +VG A+AA E +  Y  +R+ FGKP+   QA+ F+LADMAT++  ARQMV  AA  
Sbjct: 244 IAAQAVGMARAAFEAARDYARDRETFGKPIIEHQAVAFRLADMATQIAVARQMVHHAAAL 303

Query: 304 LDSQDPEATAYCAMAKRFATDIGFAVCDAALQIHGGYGYIREYPLERHFRDVRVHQILEG 363
            +   P A    +MAK FA+++   VC AA+Q  GGYGY+ ++P+ER +RDVRV QI EG
Sbjct: 304 REVGRP-ALVEASMAKLFASEMAEKVCSAAIQTLGGYGYLADFPVERIYRDVRVCQIYEG 362

Query: 364 TNEIMRLIISRRL 376
           T++I RL+ISR L
Sbjct: 363 TSDIQRLVISRNL 375