Pairwise Alignments

Query, 213 a.a., outer membrane protein W (RefSeq) from Shewanella amazonensis SB2B

Subject, 242 a.a., outer membrane protein OmpW from Marinobacter adhaerens HP15

 Score =  177 bits (449), Expect = 1e-49
 Identities = 102/242 (42%), Positives = 140/242 (57%), Gaps = 31/242 (12%)

Query: 1   MKKSYLSGLIAASLLSVVSASAFAHQAGDIIVRAGAVVVAPNESSPVV-------ADVAE 53
           M +++  G++AA++++   A   A++AGD I R G   V P+ SS  +        D A+
Sbjct: 3   MSRTFKLGVLAAAVMAAAPAVQ-AYEAGDFIGRVGVATVDPDSSSGNLNSNALGEIDGAK 61

Query: 54  FGVSNNTQLGLNFGYMLTDNWAIELLAATPFTHDV-----SLGVLGKIAETKHLPPTLVA 108
             V +N+QLGL   YMLTD   + +LAATPF HD+     +LG  GK+AETKHLPPT+  
Sbjct: 62  VSVDSNSQLGLTATYMLTDQIGVGVLAATPFKHDIKGDGAALGGTGKLAETKHLPPTITL 121

Query: 109 QYYFGNANSAFRPYVGVGVNYTNFFDTEFTNDLDGAL-----------TDLSLSTSVGWA 157
           QY+   + S F+PYVG GVNYTNFF+ + T  L               TD+ L  S G A
Sbjct: 122 QYFPMPSGSKFQPYVGAGVNYTNFFEEKTTQTLTNTYDAVAGNPGIDGTDIKLDDSFGLA 181

Query: 158 AQVGFDYSFNKNWMLNASVWYADISTDVKFN------LGDTPVVVETDIDPWVYMVSVGY 211
           A++G DY   +N  +NA+VW+ DI T+   N      + DT   ++ DIDPWVYMV V Y
Sbjct: 182 AEIGLDYMITENVGINAAVWWIDIDTEATINAYAGNAVADTS-TIDVDIDPWVYMVGVSY 240

Query: 212 KF 213
           KF
Sbjct: 241 KF 242