Pairwise Alignments

Query, 213 a.a., outer membrane protein W (RefSeq) from Shewanella amazonensis SB2B

Subject, 241 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 99.8 bits (247), Expect = 4e-26
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 39/244 (15%)

Query: 3   KSYLSGLIAASLLSVVSASAFAHQAGDIIVRAGAVVVAPNESSPVVADVAEFGVSNNTQ- 61
           K  ++G+ A   L+ ++ +A A  AG   V +G   +AP  SS  +   +  G   N   
Sbjct: 4   KQAVTGIAA---LACMTTAAHAQSAGSFYVTSGWFHLAPQSSSDPLKVTSIGGSPTNITE 60

Query: 62  ------------LGLNFGYMLTDNWAIELLAATPFTHDV----SLGVLGKIAETKHLPPT 105
                       +G   GY +TD+ A E +   P   D+    SL   GK+ + K   PT
Sbjct: 61  ANTGAKLDSADTIGFTAGYFVTDHIATEFVIGVPPKFDLEGSGSLAQFGKLGQAKQWSPT 120

Query: 106 LVAQYYFGNANSAFRPYVGVGVNYTNFFDTEFTND------LDGALTDLSLSTSVGW--A 157
           L+ +YYF    +AFRPY+G+GV+  +F D + TN       L G  T   ++T   W   
Sbjct: 121 LLFKYYFNAPTAAFRPYLGIGVSRVSFTDEKITNSAFEANVLHGPTT---VTTDSSWEPV 177

Query: 158 AQVGFDYSFNKNWMLNASVWYADISTDVKFN------LGDTPVVVETDI--DPWVYMVSV 209
              GF Y+F ++W    S+ Y  +ST  K N      +G   V  ET I  +P V  V++
Sbjct: 178 FNAGFTYAFTQHWFAGVSISYLPLSTTAKLNTAANTPVGTLNVQSETKIKLNPIVTYVNI 237

Query: 210 GYKF 213
           GY+F
Sbjct: 238 GYRF 241