Pairwise Alignments

Query, 218 a.a., 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B (from data) from Shewanella amazonensis SB2B

Subject, 216 a.a., succinyl-CoA:3-ketoacid-CoA transferase from Herbaspirillum seropedicae SmR1

 Score =  261 bits (667), Expect = 7e-75
 Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 4/215 (1%)

Query: 1   MALSREQLAQRVAKELKDGYYVNLGIGIPTLVANYIPDGMQVMLQSENGLLGMGEFPTEE 60
           MA +R+++A R AKEL+DG+YVNLGIG+PTLVAN++P  ++V LQSENGLLG+G FPTE+
Sbjct: 1   MAWTRDEMAARAAKELQDGFYVNLGIGLPTLVANHVPSDIEVWLQSENGLLGIGPFPTED 60

Query: 61  TIDPDLINAGKQTVTAVKGASFFSSAESFAMIRGGHVDLTVLGAFEVDVEGSIASWMIPG 120
            +DPDLINAGKQTVT + G+SFFSSA+SF MIRGG +++ +LGA +V  +G +A+WMIPG
Sbjct: 61  QVDPDLINAGKQTVTTIPGSSFFSSADSFGMIRGGKINIAILGAMQVSAKGDLANWMIPG 120

Query: 121 KLVKGMGGAMDLVAGADNIIVTMMHA----DKYGNSKLLPKCELPLTGFGCIKRVLTDLA 176
           K+VKGMGGAMDLVAG   ++V M H     D   + K+L  C LPLTG G + R++TDL 
Sbjct: 121 KMVKGMGGAMDLVAGVGRVVVLMEHVAKAKDGSTSKKILNDCNLPLTGVGVVNRIITDLG 180

Query: 177 FIEIKDGAFHLLERAPGVTVEEIVEKTAGKLIVPE 211
            I++  G   L+E A GVT EE++EKT   L V E
Sbjct: 181 VIDVTPGGLKLIELASGVTKEEVIEKTEAPLDVSE 215