Pairwise Alignments

Query, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

Subject, 408 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  289 bits (740), Expect = 1e-82
 Identities = 152/404 (37%), Positives = 246/404 (60%), Gaps = 13/404 (3%)

Query: 12  TGKILIGMGAGILIGLLLRNFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVVPLVFISL 71
           T ++L  +G  ++I +++    G     Q       F  +GT+FI+ +KMLV+PLV +S+
Sbjct: 5   TSRLLGNIGVQVVIAMIIGAAVGFIMGEQ----ASMFAPLGTLFIHLIKMLVIPLVLVSI 60

Query: 72  VCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGN-----ASLASESMQ 126
           + G  SL +    G++G  T  F++ T+ +A+ +A+    L QPGN     A  AS  M+
Sbjct: 61  ISGAASLGDSPSAGKIGIGTFGFFIITSGVAVALALLLGSLFQPGNGVDFTAHSASGLMK 120

Query: 127 YSAKEA--PSLADVLINIVPSNPMKALSEGNMLQIIIFAVIFGFAISHI-GERGRRVAAL 183
            + +    P + D  I ++P+N  ++L+ GN+LQI++F++ FG A++ + GE  + + A 
Sbjct: 121 VTEEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFFGIALTKVKGEGSKPILAA 180

Query: 184 FDDLNEVIMRVVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFVV 243
            + + +  + ++  +M +AP GVF LM     T G + LE V K F + ++ +L  GF+ 
Sbjct: 181 LNTIVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVLGILLFGFLF 240

Query: 244 YPTLLKLFSGLSPLMFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTLP 303
           +P L++LFS +S   FI  M+  Q+ A STASS ATLPV ME  E  LG     ASF LP
Sbjct: 241 FPLLVQLFSNVSAKKFISVMKKPQVMALSTASSMATLPVNMETCEEELGVSKPTASFVLP 300

Query: 304 LGATINMDGTAIMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVMLA 363
           LGATINM G AI  G+  +F AQ++GIDL++  Y  ++ T+TL +IG AGVPG   +++A
Sbjct: 301 LGATINMSGNAIYYGLVAIFFAQMYGIDLSLGAYMAIIFTSTLGAIGQAGVPGPSFLVVA 360

Query: 364 MVLNQVGLPVEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAK 407
           ++L   G+P++G+ L+  +DR+ DM+RT++N+TGD    V++ K
Sbjct: 361 VLL-AAGIPIDGLPLLFALDRVFDMIRTSLNITGDAACAVILDK 403