Pairwise Alignments

Query, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

Subject, 437 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  302 bits (773), Expect = 2e-86
 Identities = 158/407 (38%), Positives = 250/407 (61%), Gaps = 3/407 (0%)

Query: 11  LTGKILIGMGAGILIGLLLRNFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVVPLVFIS 70
           L+ +I IG+ +G+++G +++ F     +    + E     +GT+F+N + M+VVPLVF+S
Sbjct: 22  LSTRIFIGLFSGLILGSIIQYFLADVGFFSGTLVE-VASGLGTMFVNMIMMMVVPLVFVS 80

Query: 71  LVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGNA--SLASESMQYS 128
           +VCG   L +    GRLGGKT  FY+  T +A+  A++ A+L++PG           + +
Sbjct: 81  IVCGVLELDDLKSFGRLGGKTFGFYIINTLVAIFAALTVALLLKPGLGVDMTGGTGAEIT 140

Query: 129 AKEAPSLADVLINIVPSNPMKALSEGNMLQIIIFAVIFGFAISHIGERGRRVAALFDDLN 188
           A E P+L  +++NIVPSNP+ A + GNMLQ+I  A++ G  I  +      +   F + N
Sbjct: 141 ATELPNLMQLIVNIVPSNPVAAFTSGNMLQVIFMALLVGGVIKAMNGAVPLLQQGFMEGN 200

Query: 189 EVIMRVVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFVVYPTLL 248
           +++M+++ ++MQLAP GVFALM KL  TL      SV++Y +++L +LL   FVVYP  +
Sbjct: 201 KLMMKLIGVVMQLAPIGVFALMFKLGATLEASLFLSVVEYLVVILSLLLLWIFVVYPWAV 260

Query: 249 KLFSGLSPLMFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTLPLGATI 308
            LF+ +S   F  K ++  LF+ STASSNAT+PVTM     +LG    VA F +PLGAT+
Sbjct: 261 SLFTPVSAKTFRAKTQEQILFSLSTASSNATIPVTMRTLTEKLGVKRAVAGFGVPLGATM 320

Query: 309 NMDGTAIMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVMLAMVLNQ 368
           NM G +I   +A  F+A  FG  + +     ++ +  L S+G  GVPG G+VM+ ++++Q
Sbjct: 321 NMGGVSIYITIAIFFVANSFGAPIAMDQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQ 380

Query: 369 VGLPVEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAKSEGALNEA 415
           +GLPVE   ++  +DR++DMV T+ NV GD     ++  +E A +EA
Sbjct: 381 MGLPVEAFVIVAALDRLIDMVLTSCNVVGDAAVLTIVDATENAHDEA 427