Pairwise Alignments

Query, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

Subject, 416 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  297 bits (760), Expect = 5e-85
 Identities = 165/405 (40%), Positives = 245/405 (60%), Gaps = 15/405 (3%)

Query: 14  KILIGMGAGILIGLLLRNFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVVPLVFISLVC 73
           K+L G   G+ +G++L     G +  Q          +G +FI ++KMLV PL+F ++V 
Sbjct: 13  KVLAGFILGVGLGVVL-----GEQATQ-------LKPLGDLFIAAIKMLVAPLIFCAIVV 60

Query: 74  GTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGNASLASESMQYSAKEAP 133
              SL     L RL  KTLA ++ T  IA ++ ++   L+  G  SL   + +   +  P
Sbjct: 61  SITSLGNDVSLKRLSIKTLAMFMLTGTIASLIGLAIGSLIDMGG-SLELATTEVRERNVP 119

Query: 134 SLADVLINIVPSNPMKALSEGNMLQIIIFAVIFGFAISHIGERGRRVAALFDDLNEVIMR 193
             A VL++++P NP  +L+EG +LQII+FA + G AI+ IGE+   +    +   EV+ +
Sbjct: 120 GFAQVLLDMIPVNPFASLAEGKVLQIIVFAALVGIAINKIGEKAEPLKRTIEAGAEVMFQ 179

Query: 194 VVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFVVYPTLLKLFSG 253
           +  +++QL P GVF LM  +    G+ TL  + K+   + +  L H   VY  L++  +G
Sbjct: 180 LTRMVLQLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAALIHMVFVYGGLVRFGAG 239

Query: 254 LSPLMFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTLPLGATINMDGT 313
           LS + F RK    QL AF+TASS  TLP +  A+E  +G   K  +F LPLGAT+NMDG 
Sbjct: 240 LSAVQFFRKAMPAQLVAFTTASSFGTLPASTRATE-TMGVSKKYGAFVLPLGATMNMDGC 298

Query: 314 A-IMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVMLAMVLNQVGLP 372
             I   +A +FIAQ++GI L +TDY ++ +TAT+AS+GTAGVPG  +VML++ L  VGLP
Sbjct: 299 GGIYPAIAAIFIAQIYGIPLEMTDYMLIAVTATVASVGTAGVPGSAMVMLSVTLGVVGLP 358

Query: 373 VEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAKSEGALNEAVF 417
           +EGIA I  +DR++DM+RTA NVTGD +  VV+ KSEG L++  F
Sbjct: 359 LEGIAFIASIDRVIDMIRTATNVTGDMMTAVVVGKSEGQLDQEQF 403