Pairwise Alignments

Query, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

Subject, 417 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  295 bits (754), Expect = 2e-84
 Identities = 161/412 (39%), Positives = 243/412 (58%), Gaps = 15/412 (3%)

Query: 7   SKIGLTGKILIGMGAGILIGLLLRNFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVVPL 66
           S+I    K+L G   G L+G+LL              T      +G +FI+++KMLV PL
Sbjct: 7   SRIPFWQKVLAGFILGALVGVLLGE------------TATVLKPLGDLFISAIKMLVAPL 54

Query: 67  VFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGNASLASESMQ 126
           VF ++V    SL   + L RL  KTL  ++ T  +A ++ ++   L+  G  ++   + +
Sbjct: 55  VFCAIVVSITSLGSQTNLKRLSLKTLGMFMLTGTVASLIGLAVGSLIDMGG-TMQLATTE 113

Query: 127 YSAKEAPSLADVLINIVPSNPMKALSEGNMLQIIIFAVIFGFAISHIGERGRRVAALFDD 186
              +  P  A VL++++P NP  +L++G +LQII+FA + G AI+ +GE+   +    + 
Sbjct: 114 VRERNIPGFAQVLLDMIPVNPFASLADGKVLQIIVFAALVGIAINKVGEKAEPLKRTIEA 173

Query: 187 LNEVIMRVVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFVVYPT 246
             EV+ ++  ++++L P GVF LM  +    G+ TL  + K+   + +  L H   VY  
Sbjct: 174 GAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIAAIYIAALIHMIFVYGG 233

Query: 247 LLKLFSGLSPLMFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTLPLGA 306
           L+K  +GLSP+ F RK    QL AFST+SS  TLP +  A E  +G   + ++F +PLGA
Sbjct: 234 LVKFAAGLSPVQFFRKAMPAQLVAFSTSSSFGTLPASTRAVE-TMGVSKRYSAFVMPLGA 292

Query: 307 TINMDGTA-IMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVMLAMV 365
           T+NMDG   I   +A +FIAQ++GI L   DY M+ +TAT+AS+GTAGVPG  +VML + 
Sbjct: 293 TMNMDGCGGIYPAIAAIFIAQIYGIPLDTLDYVMIAVTATVASVGTAGVPGSAMVMLTVT 352

Query: 366 LNQVGLPVEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAKSEGALNEAVF 417
           L  +GLP+EGIA I  +DR++DM+RTA NVTGD +  VVI KSE  L+   F
Sbjct: 353 LGVIGLPLEGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELDVEQF 404