Pairwise Alignments

Query, 381 a.a., exonuclease SbcD, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 414 a.a., Exonuclease SbcD from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (348), Expect = 2e-37
 Identities = 100/266 (37%), Positives = 133/266 (50%), Gaps = 18/266 (6%)

Query: 1   MRFIHTSDWHLGRTLHNQSLLDEQAQMLETLLTLIETHEVDALVIAGDIFDRSVPPAAAV 60
           +R  HTSDWHLG+ LH Q    E A  L+ LL  +   + D L+IAGDIFD   PP  A 
Sbjct: 1   LRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLAGEKPDVLLIAGDIFDTVNPPVKAQ 60

Query: 61  SLLDDFLDKVVQQ-LKVSVIAIGGNHDGQERLAFGARQM-------AGAGLYI---QGPV 109
             L DF+    +Q   ++++ I GNHD   R+   A  M        G  L++   Q  V
Sbjct: 61  ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV 120

Query: 110 RASIEPVHIDGKQGAAFFYPIPYAEPALVRHL-LNDEDIHSHQDAMAALLAKVTAHNSDG 168
              + P+     +  A+   +P+  PA V    L D+ +         L+A   +    G
Sbjct: 121 ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANSKRKKG 180

Query: 169 LPKIVISHCFLDGGNES-DSERPLSIGGADKISPALFAP-FDYAALGHLHGPQ-YKGAEH 225
              I ISH  + GG+ S DSER L IG A+ +  +LF P   Y ALGHLH PQ   G E 
Sbjct: 181 QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER 240

Query: 226 VRYSGSPLKYSFSE---QHQNKSVTL 248
           +RYSGSP+  SFSE   QHQ   +TL
Sbjct: 241 IRYSGSPIPLSFSEIGYQHQILDITL 266