Pairwise Alignments

Query, 381 a.a., exonuclease SbcD, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 416 a.a., exonuclease SbcCD subunit D from Synechocystis sp000284455 PCC 6803

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 1   MRFIHTSDWHLGRTLHNQSL---------LDEQAQMLETLLTLIETHEVDALVIAGDIF- 50
           ++ +H SD HLG    +  +         L++  Q L   +        D ++  GD F 
Sbjct: 2   LKVLHLSDIHLGSGFSHGHINPATGLNTRLEDFIQSLRLCIDRAIAEPADVVLFGGDAFP 61

Query: 51  DRSVPPAAAVSLLDDFLDKVVQQLKVSVIAIGGNHDGQERLAFGARQMAGAGLYIQGPVR 110
           D + PP    +   +F  + +    +  + + GNHD   + + GA       L + G + 
Sbjct: 62  DATPPPYVQEAFAAEF--RRLADADIPTVLLVGNHDQHSQGSGGASLCIYRTLAVPGFIV 119

Query: 111 ASIEPVH-IDGKQGAAFFYPIPYAEPALVRHLLNDEDIHSHQDAMAALLAKVTAHNSDG- 168
                 H I    G      +P+   + +  L   E      +A+  LL K      +G 
Sbjct: 120 GDRLATHLIPTANGDLQIVTLPWLTRSTL--LTRPETEGLSLEAINLLLLKKLQPILEGE 177

Query: 169 -------LPKIVISHCFLDGGNESDSERPLSIGGADKISPALF--APFDYAALGHLHGPQ 219
                  LP I+++H   D      +E+ LS+G    I  AL     FDY ALGH+H  Q
Sbjct: 178 IRSLDPQLPTILLAHLMADRATFG-AEKTLSVGKGFTIPLALINRPEFDYVALGHVHKHQ 236

Query: 220 YKGAEH---VRYSGSPLKYSFSEQHQNKSVTLVNILPGQAP-DIRLLPIKPQRDVRI 272
                +   + Y GS  +  F E+ ++K    + I  G+       LP +P + +++
Sbjct: 237 NLNPHNNPPIVYPGSIERVDFGEEKEDKGYIWLEISKGKVDWQFCPLPARPFKTIKV 293