Pairwise Alignments

Query, 907 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

Subject, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  392 bits (1006), Expect = e-113
 Identities = 302/955 (31%), Positives = 450/955 (47%), Gaps = 150/955 (15%)

Query: 1   MLKNSMLAKSVRFALVAGATTAAFTAPTVYAADEGEKVERIEVTGSRIKRTDLETASPIT 60
           M+K + +A ++  A+V+     AF A + +AA+E  KVERIEVTGSRI+R D+ETASP+T
Sbjct: 1   MIKRTKVASAINLAVVSSIAAGAFVASSAFAAEETAKVERIEVTGSRIQRQDMETASPVT 60

Query: 61  MFSAEDIANSGVATLEDFVQNIPAINGGAEGSSVNNGSRGFATASLRGLGSGRTLVLING 120
           +  A  I   G  +++  +Q   ++ G A GS+ NNG+ G A   LRG+GS RTLVL+NG
Sbjct: 61  VIDAAAIKAEGFTSVDQMLQVQTSMAGAAVGSTTNNGADGVAQVDLRGMGSQRTLVLLNG 120

Query: 121 RRFASG--------DLNSIPTAYVERIEVLRDGASTVYGSDAIAGVINFITKKDFEGIEF 172
           RR  +         DLNSIP A + R+E+L+DGAS VYGSDAIAGV+N ITKKDFEG +F
Sbjct: 121 RRMVNSGSGADSAVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGFQF 180

Query: 173 GAQYDIASEGDGEKTLLSVTTGTSSDRGNVVMSLQYTKREAIWQGDRDFSACPIFERGGE 232
                   +GDG+   +S   G ++D GN      Y+ R  + QGDRD+          +
Sbjct: 181 DMNGSGTDKGDGQSGDVSALYGFNTDGGNYTFGAAYSDRRGVIQGDRDWY---------D 231

Query: 233 KVCGGSGTIPYGQFFYTGANSPAGGHVIDPSTGAIRKFDQAVDGYNYAVASYMVTPQEVF 292
            +   S  IP G              VID +   +++     + Y+Y+   Y  TP E  
Sbjct: 232 PLDNTSSIIPTGTL---------NQKVIDANGNWVKR----TETYDYSNDVYFQTPSERR 278

Query: 293 SINGAGRYEISDTLTGFMEGGFTNRQSDQLMAPEGTFWGPTMPASNPYNPTGEDLI---- 348
           S+      E+ + +    +  +TNR+S+Q +A +        PA    N  G+  +    
Sbjct: 279 SLFANMTQELGNDVVLTADAIYTNRRSNQQLAAQ--------PAQIKLNVCGDPRVQDPT 330

Query: 349 ------------------------VVRRLAETGGRGFTQDFSDYRMVFGLEGSLGDY--- 381
                                     RR+ + G R + QD   +R+  GL GSL  +   
Sbjct: 331 AGCLTLDQGMIDAGIKADARGQVQYNRRMNDVGPRIYNQDTDTWRLSAGLAGSLDVHTGM 390

Query: 382 YWDLSYNFARYVDSRLDLGRVNPTRAETLLDPDLCAKDSDCPGIWNPLAEGT-LTPEMLA 440
            W++ Y F +   +    G  N   A TL+   + A     P  W    EG+ LT +M  
Sbjct: 391 NWNVDYTFGK---NEAKTGVDNSINA-TLMANSIYAD----PYAW---FEGSPLTDDMKD 439

Query: 441 YAFVPNSPVVRGETRQLQGNISGSLFGLELPGGEVMFAAGFEKRWDEYQSVPDGAASIGQ 500
            ++   S     E + L   ++G LF  +L  G V FA G E R +     PD     G 
Sbjct: 440 VSYQQQS-TGGNEQQTLSAGLNGELF--DLSAGAVGFAIGAEYRRESGFYNPDPVVVAGD 496

Query: 501 IYSVAGEPTSGDYSVNEAYAEFDMPVLEGLPFAESVRVTAAVRYSDFDFLDDGSTNTKFG 560
             +   +PTSG+Y+V   + E        +PF E +    A+R  D+      +T  K G
Sbjct: 497 STAAQQDPTSGNYNVISIFEEV------SVPFTEKLTGEFALRLDDYSTFGK-ATTWKIG 549

Query: 561 LEWVPFDGLMLRSTLADGFRAPSVSELYAPQSETNLAYAEPCKNYATGTQNATVKANCAA 620
           L +   D LM+R+  A GFRAPSV+ELY   S +      P    +  T    V      
Sbjct: 550 LTYTATDELMVRTVAATGFRAPSVAELYGGNSGSFDYLTNPWLPASEQTGQILV------ 603

Query: 621 EGLPGNFELSSNQSSTVVGGNPDLQPEESESFTAGFVYSHDI--GFSASVDYFNIEITNG 678
                      N++S     +PDL+PEESES+TAG VYS     G S ++DY+  ++T+ 
Sbjct: 604 -----------NRTS-----DPDLKPEESESYTAGLVYSPSYIDGMSITLDYWRFKVTDA 647

Query: 679 IGTAGTDNVVSACWNSANFSSPLCDLIKGPSLTGDAPHPTSPYRTALGPVAGILLTNANL 738
           I  A     + AC                    GDA   ++   TA G +  +     N+
Sbjct: 648 IARADVQVGLDACH------------------AGDAEACSTFNITADGDLFNLTSALTNV 689

Query: 739 STFETSGYDFDLSYKTDIGEGQFSALLNGTYLEQYDYLPYEGADIVSAAGKVAADQWETT 798
            + +TSG DF+L+Y  ++    +    + TYL +++       D  +  G +     +  
Sbjct: 690 GSQDTSGIDFNLAYNFELFGLDWKVSNDTTYLIKFE------QDGENYTGTI-----DGN 738

Query: 799 LAVFPRLRANLSLNYTMDNWSVSWQTRYQSEGEDYFASEDNLDNI------ADSIWYHDV 852
           +  + R+R N S++   D+WSV +  RY     D +   D  DN        DSI YH++
Sbjct: 739 MGAYARVRNNFSISAGQDDWSVMYFNRYIRSMTDVYTDYDANDNPFVAVRGVDSILYHNI 798

Query: 853 QGTYFAMDNLSLTVGVRNLFDEEAPYISNNQDMNTIPVSYDTAGQYWYARVNVKF 907
            GTY   DN ++++GV+NL DE+  Y++N  D  T+P  YDT G+  Y  V VKF
Sbjct: 799 SGTYHVSDNTTVSLGVKNLTDEKPLYVTNGSDAGTVPQVYDTVGRTIYGGVTVKF 853