Pairwise Alignments

Query, 907 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

Subject, 936 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  425 bits (1092), Expect = e-123
 Identities = 322/978 (32%), Positives = 471/978 (48%), Gaps = 113/978 (11%)

Query: 1   MLKNSMLAKSVRFALVAGATTAAFTAPTVYAADEG---EKVERIEVTGSRIKRTDLETAS 57
           M KN++LAKSVRFAL+ G    A   P V AADE    +KVERIEVTGSRIKRTD+E AS
Sbjct: 1   MHKNNLLAKSVRFALIGGVAATALNVPLVMAADEAGADKKVERIEVTGSRIKRTDMEAAS 60

Query: 58  PITMFSAEDIANSGVATLEDFVQNIPAINGGAEGSSVNNGSRGFATASLRGLGSGRTLVL 117
           P+   + ++I  +G+ ++ D +Q IPA  G A  ++ NNG  G     LR LGS R LVL
Sbjct: 61  PVLSMNRDEIEATGMISVGDILQTIPAA-GSALNTAFNNGGDGSTNMDLRNLGSQRLLVL 119

Query: 118 INGRRFASG-----DLNSIPTAYVERIEVLRDGASTVYGSDAIAGVINFITKKDFEGIE- 171
           +NG+R+ S      DLN+IPT+ +ERI+VL+DGAS VYGSDAIAGV+N IT+K+FEG+E 
Sbjct: 120 VNGKRWISSLGSTVDLNTIPTSTIERIDVLKDGASAVYGSDAIAGVVNIITRKNFEGVEV 179

Query: 172 --FGAQYDIASEGDGEKTLLSVTTGTSSDRGNVVMSLQYTKREAIWQGDRDFSACPIFER 229
             +G Q   A   DG +     T G+ S++G ++ ++ +  ++ IW GDRD S       
Sbjct: 180 SVYGGQN--AKYDDGRQYTADFTVGSVSEKGGLLFNMAHVTQQPIWAGDRDISDTGYSST 237

Query: 230 GGEK--VCGGSGTIPYGQFFYTGANSPAGGHVID----PSTGAIRKFDQ-----AVDGYN 278
                    GS      Q        P    + D      TGA    DQ       D YN
Sbjct: 238 ADNTRIRVKGSQLNQANQDALAAIGKPNSSGIYDYMSKEGTGANVGMDQFRPRTGSDVYN 297

Query: 279 YAVASYMVTPQEVFSINGAGRYEISDTLTGFMEGGFTNRQSDQLMAPEGTFWGPTMPA-- 336
           +A  +Y+ TPQ   S    G Y+ISD L    +   TNR+S Q +AP     G +  A  
Sbjct: 298 FAPDNYLSTPQNRNSFYVQGFYDISDNLRVVSDFMMTNRKSSQELAPMPLTLGASFGAAA 357

Query: 337 -------SNPYNPTGEDL-------------------IVVRRLAETGGRGFTQDFSDYRM 370
                  +N YNP GE L                    + RR+ E G R + Q+ + YR 
Sbjct: 358 SRVDIGGNNIYNPFGETLYGDSARAVANGKPVGYVPYALQRRMVEAGSRQYNQNDTTYRA 417

Query: 371 VFGLEGSLGD-YYWDLSYNFARYVDSRLDLGRVNPTRAETLLDPDLCAKDSDCPGIWNPL 429
           + GLEG++ D + W  SY + +     L  G +N TR    L  D C   + C  +    
Sbjct: 418 MVGLEGNINDNWSWTASYIYGQNNQDVLTTGLLNLTRINQALG-DNCNASNGCVALNLFG 476

Query: 430 AEGTLTPEMLAYAFVPNSPVVRGETRQLQGNISGSLFGLELPGGEVMFAAGFEKRWDEYQ 489
             G++T +M+ Y    +        +    NI+G LF  +LP G V  A G E+R +   
Sbjct: 477 GPGSVTQDMVDYITFDSVSRSGLTMKDYTFNIAGDLF--DLPAGPVGLAFGLERREESGF 534

Query: 490 SVPDGAASIGQIYSVAGEPTSGDYSVNEAYAEFDMPVLEGLPFAESVRVTAAVRYSDFDF 549
             PD     G+      + TSG + ++EAYAE  +PV+      ES+ +T AVR SD D 
Sbjct: 535 DTPDPLTVTGESSGNQRDATSGGFRLDEAYAELAIPVI------ESLLITPAVRVSDHDA 588

Query: 550 LDDGSTNTKFGLEWVPFDGLMLRSTLADGFRAPSVSELYAPQSETNLAYAEPCKNYATGT 609
             + +T  K G E+ P D ++LR T A G+RAPS+S+LYA  +++   + +PC    +  
Sbjct: 589 YGNNTTG-KVGAEFRPMDDMLLRGTWAQGYRAPSISDLYAGSADSYPTWNDPCNTRDSKG 647

Query: 610 QNATVKANCAAEGLPGNFELSSNQSSTVVGGNPDLQPEESESFTAGFVYSHD--IGFSAS 667
               +       G+P  +  ++ Q       +PDL+PE SES+T G VY+     G   +
Sbjct: 648 NVLNISGLPGCAGVPDGYRQANTQIRISQVSSPDLKPETSESYTFGTVYNPSWLEGAEFT 707

Query: 668 VDYFNIEITNGIGTAGTDNVVSACWNSANFSSPLCDLIKGPSLTGDAPHPTSPYRTALGP 727
           VDY+NI++ + IG  G   +   C      SS  CD I                R +LG 
Sbjct: 708 VDYYNIKVEDAIGRYGHTTIARECATGDKVSS--CDKID---------------RDSLGN 750

Query: 728 VAGILLTNANLSTFETSGYDFDLSYK-TDIGEGQFSALLNGTYLEQYDYLPYEGADIVSA 786
           +  +     N  T+E  G DF  +Y+  +   G F   L+  Y+   ++   + A I   
Sbjct: 751 IVDLRNFLQNAGTYEVEGIDFFTAYRFPETSFGSFKTSLDLAYVLGNEFDGEDRAGIQYG 810

Query: 787 AGKVAADQWETTLAVFPRLRANLSLNYTMDNWSVSWQTRYQSE-GEDYFASED-NLDNIA 844
            G             FP L+ +L++++ M +W   W+ RY  E   D++A++  N D   
Sbjct: 811 DGG------------FPELKGSLNIDWAMGDWDAHWKMRYVGELTSDFYANDPANYDFYK 858

Query: 845 D--------SIWYHDVQGTYFAMD-NLSLTVGVRNLF--DEEAPYISNNQDM---NTIPV 890
           D        +   H+V   Y   D N  +++G+ NLF  + +A   +NN+ +   N    
Sbjct: 859 DNGYRETFSAYMVHNVSVGYNIEDYNTKVSLGINNLFATEPQAEGPTNNEALSSNNFSVT 918

Query: 891 SYD-TAGQYWYARVNVKF 907
            YD    ++ Y R   KF
Sbjct: 919 EYDVNMDRFIYLRATTKF 936