Pairwise Alignments

Query, 907 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

Subject, 1007 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  283 bits (723), Expect = 5e-80
 Identities = 264/993 (26%), Positives = 441/993 (44%), Gaps = 147/993 (14%)

Query: 32   ADEGEKVERIEVTGSRIKRTDLETASPITMFSAEDIANSGVATLEDF-VQNIPAINGGAE 90
            AD+ + +E++ VTGSRIKR     ++P+    A+DIA+SG+ +L D  V  IPA+  G  
Sbjct: 45   ADKNDGIEKVTVTGSRIKRDSFSLSTPLQGLDAKDIADSGIGSLADILVDQIPALAEGVS 104

Query: 91   G----SSVNNGSRGFATASLRGLGSGRTLVLINGRRFASGD-------LNSIPTAYVERI 139
                 SSV N   G +T  LR LG+ RTL LI+GRR  S         L++IP A V+++
Sbjct: 105  STNSQSSVQN--TGLSTIDLRNLGTDRTLTLIDGRRVVSNSYSGNYVSLSTIPAAMVDKV 162

Query: 140  EVLRDGASTVYGSDAIAGVINFITKKDFEGIEFGAQYDIASEGDGEKTLLSVTTGT--SS 197
            E++  GAS VYGSDAIAGV+N IT+++  G E  A+    +EG G +T +    G   +S
Sbjct: 163  EIITGGASAVYGSDAIAGVVNIITQQNKTGFEINARGGETTEGGGRETTVDAGYGADFNS 222

Query: 198  DRGNVVMSLQYTKREAIWQGDRDFSACPI-FERGGEKVCGGSGTIPYGQF--------FY 248
            D+G +  S  Y K+  ++  DR+ +     F    +++C    T    Q         + 
Sbjct: 223  DKGYIYASATYDKQHGLFATDRERALYESSFAYDKKQMCNTMNTADGYQCMRDITPEDWR 282

Query: 249  TGANSPAGGHVIDPS-----TGAIRKFDQAVDGYNYAVASYMVTPQEVFSINGAGRYEIS 303
              +N   GG     +     T     F +  DGYN      +  P++  +      Y++S
Sbjct: 283  ERSNDIVGGRFKSNAWWYDGTELKTDFKEERDGYNGYTTGLLKVPEDTLATAVKVNYDLS 342

Query: 304  DTLTGFMEGGFTNRQS------------------DQLMAPEGTFWGPTMPASNPYNPT-- 343
            +++    +  F+   +                  D +    G     ++ A+NPY P   
Sbjct: 343  ESVRANAQVQFSRNTAFRRTDAEGQDYNDAELYIDPITGLPGMIDAGSILANNPYIPAEI 402

Query: 344  ----GEDLIVVRRLAETGGRGFTQDFSDYRMVFGLEGSLGDYY-WDLSYNFARYVDSRLD 398
                G+ +   RR  E G      + +  R   GL+G L + + WD S  + ++   +  
Sbjct: 403  AATGGKSITWDRRFEEVGPVESDNERTTLRTWAGLQGDLFETWTWDASVGYGQFEQRQRR 462

Query: 399  LGRVNPTRAETLLDPDL--------CAKDS----DCPGIWNPLAEGTLTPEMLAYAFVPN 446
               ++  R    L+           CA ++     C  + N   EG+++ E   Y  +  
Sbjct: 463  SNEISIRRLRNALNAVYAADGVTIQCASEAARAEGCVPV-NIFGEGSISKEGADY--IRA 519

Query: 447  SPVVRGETRQLQ--GNISGSLFGLELPGGEVMFAAGFEKRWDEYQSVPDGAASIGQIYSV 504
            +P +  +  Q    G ISG LF  ELP G V  A G E R D      D A     I   
Sbjct: 520  NPYINTDITQFNALGYISGELF--ELPAGGVQSAFGMEYRRDTQAVDTDKAMRGDAITFN 577

Query: 505  AGEPTSGDYSVNEAYAEFDMPVLEGLPFAESVRVTAAVRYSDFDFLD-DGSTNTKFGLEW 563
               P  GD +V EA+ E ++P+L  + FA  + V  ++R +D+   + D  ++ + G+ W
Sbjct: 578  DVPPFEGDVTVWEAFGEANLPLLRDMSFANKLDVDVSLRLADYSQKNIDLMSSYRTGILW 637

Query: 564  VPFDGLMLRSTLADGFRAPSVSELYAPQSETNLAYAEPCKNYATGTQNATVKANC----- 618
             P     LR+  +   RAP+++EL +P      +  + C N  T T       +C     
Sbjct: 638  EPIANYALRANYSRSQRAPNITELISPPRGDYDSIRDIC-NGVTATSTGAGHDSCRLDPG 696

Query: 619  --AAEGLPGNFELSSNQSSTVVGGNPDLQPEESESFTAGFVYSHDI--GFSASVDYFNIE 674
               A    G F+  +    +   GN +L  E ++++T GF  +     GF+ +VDY++I+
Sbjct: 697  IAVAIASTGTFKAETGSKYSPNAGNENLTEETADTYTLGFTMAPAFLEGFNLAVDYYDIK 756

Query: 675  ITNGIGTAGTDNVVSACWNSANFSSPLCDLIKGPSLTGDAPHPTSPYRTALGPVAGILLT 734
            + + IG+   +++++ C+NS+N           P   G+  +     R   G +  ++  
Sbjct: 757  VADAIGSLSNEDILAECYNSSN-----------PYGAGN-EYCQDITRDTEGQITQVIQQ 804

Query: 735  NANLSTFETSGYDFDLSYKTDIGE-GQFSALLNGTYLEQYDYLPYEGADIVSAAGKVAAD 793
              NL+   T G DF ++Y+ ++ + G+ S   N T++ +Y    Y GAD     G VA D
Sbjct: 805  ELNLNDIVTRGIDFAMAYEWELADYGELSLNTNWTHVLEYS-SSYYGAD-----GLVAED 858

Query: 794  Q-WETTLAVFPRLRANLSLNYTMDNWSVSWQTRYQSEGEDYFASEDNLD----------- 841
               E T  +F   R  LSL ++ D+W V W  +Y+S   D   S D ++           
Sbjct: 859  YVGELTSGIFED-RGTLSLTWSNDDWRVRWSAKYKSAMVD---SHDRVEEWNVLKAENQA 914

Query: 842  -------------NIADSIWY-----HDVQGTY---FAMDNLSLTVGVRNLFDEEAPYIS 880
                            + ++Y     HD+  +Y    +   L L  G+RN+FD + P+++
Sbjct: 915  KLDAGDASAVANPETPEFLFYGSYITHDLSVSYTMDVSQAELRLYGGLRNIFDNQGPWVA 974

Query: 881  NNQDM-NTIPVSYDTA-----GQYWYARVNVKF 907
            +  D+  T   +Y +A     G+Y Y    +KF
Sbjct: 975  DGGDLIETGTGNYSSAYGGGVGRYAYLGAELKF 1007