Pairwise Alignments

Query, 801 a.a., DNA polymerase II (RefSeq) from Shewanella amazonensis SB2B

Subject, 791 a.a., DNA polymerase II from Cupriavidus basilensis FW507-4G11

 Score =  613 bits (1582), Expect = e-180
 Identities = 353/778 (45%), Positives = 482/778 (61%), Gaps = 19/778 (2%)

Query: 21  RGRVLTRANVQRSGDTVLEYLIKTVNGPVKVEVHNQRPMAFCHSDDVERL-LVEGAETEV 79
           +G +LTR     +  T +E+ + T +GP  + + +Q  +AF  ++  E    +   E  V
Sbjct: 6   QGFLLTRHWRDTAAGTEVEFWLATDSGPRHIRLAHQPSVAFIPAEQRETAEAILCGERNV 65

Query: 80  WSHPLELQSFSRQPVHAIYCRTGLMLKRLVNRAQELGIALYEADIKPEQRFLIERFVALD 139
               L L  F R+PV  +YC+    L +L    +E G+++YEADI+P +R+L+ERF+   
Sbjct: 66  ALRELPLADFHRRPVLGLYCQHYRQLIKLEKLLKEAGVSVYEADIRPPERYLMERFITAP 125

Query: 140 AEFFGHFDSS-GPSRFVASRVRATSQHIP-LKAVSLDIECSMSGELYSIGLYGDCEPKVI 197
             F G  +++ G    + S+++    + P LK VSLDIE +  G+LYSI L G  + +V 
Sbjct: 126 VWFAGEANAAHGGGTLLNSQMKPGPAYRPTLKLVSLDIETTAHGDLYSIALEGCGQRQVY 185

Query: 198 IVGEGETELTCHRDGVEHKVAVEWACDEVALLLSLQRWFMEVDPDILLGWAVVTFDLSLL 257
           ++G        + D       +E+      +L  L +W  + DPD ++GW VV FDL +L
Sbjct: 186 MLGPP------NGDDSALDFDLEYCASHPLMLQKLNQWLAQHDPDAIIGWNVVQFDLRVL 239

Query: 258 WRRAKHHGMRLCIGRFGKPLAWKVED-KHRPETLDLSGRVVLDGIDWLKAAFYQFDSFAL 316
            + A  + + L  GR G  L W+    K        +GR+++DGI+ L++A + F SF+L
Sbjct: 240 QKHADRYQVPLLFGRAGNVLEWREHGFKENHFFACAAGRLIIDGIEALRSATWNFPSFSL 299

Query: 317 DRVAGELLGEGKAIHNPDDRGEEITRLFREDKAALAYYNLTDCRLVWDIFQKTDLIHFAL 376
           + VA  LLGEGK+I +P  R  EI R F EDK ALA YNL DC LV  IF KT+L+ F L
Sbjct: 300 ENVAQTLLGEGKSIDDPYQRMAEIDRRFAEDKPALARYNLKDCELVTRIFAKTELLTFLL 359

Query: 377 ERARLTGLEFGRVGASIAAFNHLYLPHLHRAGFVAPAMQTVPGPDSPGGYVMDSVPGLYR 436
           ERA +TGL   R G S+AAF HLY+P +HR G+VAP +  VP   SPGG+VMDS PGLY 
Sbjct: 360 ERAAVTGLPADRSGGSVAAFTHLYMPLMHRQGYVAPNLGEVPEGASPGGFVMDSQPGLYD 419

Query: 437 NVLVLDYKSLYPSIIRTFLIDPKGLVLGLSEP-EAMSVEGFRGARFSRQSPILPKLVATL 495
           +VLVLDYKSLYPSIIRTFLIDP GLV GL +P +  SV GFRGARFSR    LP +V  +
Sbjct: 420 SVLVLDYKSLYPSIIRTFLIDPLGLVEGLQDPSDESSVPGFRGARFSRTRHCLPAIVKQI 479

Query: 496 ASRREEAKANQNGPMSQAVKIIMNSLYGVLGSRGCVFHDYRLASSITLRGHEIMRTTKAW 555
              RE AK   N P+SQA+KIIMN+ YGVLGS  C F D RLASSIT+RGHEIM  T+  
Sbjct: 480 WQGREAAKREGNKPLSQALKIIMNAFYGVLGSSVCRFFDPRLASSITMRGHEIMHRTREL 539

Query: 556 IEAEGFQVIYGDTDSTFVWLGDEAG--NAKATGRALVDMVNQRWREQLREDKGLECFLEL 613
           IEA+G+QVIYGDTDSTFVWL       +A   GR LV  VNQ W++ L++  GLE  LEL
Sbjct: 540 IEAQGYQVIYGDTDSTFVWLMQPHAEEDADRIGRMLVQQVNQWWQQHLQQQYGLESALEL 599

Query: 614 EFERHFEQFFMPTLRHSTEGSKKRYVGLY--DNGNEKVLVFKGMEQVRSDWSPLARRVQY 671
           ++E H+ +F MPT+R + +GSKKRY GL    +G+E+ +V+KG+E VR+DW+PLA++ Q 
Sbjct: 600 QYETHYRRFLMPTVRGAEQGSKKRYAGLVAKADGSEE-MVYKGLETVRTDWTPLAQQFQQ 658

Query: 672 ELYRRLFQQENLTEYVQEVEKSLYSGELDDELVFHKRLKRDISQYTAKSAPHVKAAALLV 731
            LY+R+F+++   EYV++  +   SGE D +LV+ KRL+R +  Y     PHV+AA +  
Sbjct: 659 ALYQRVFKKQPYREYVRDYVRRTMSGEFDAQLVYRKRLRRTLEDYQRNVPPHVRAARIAD 718

Query: 732 SATGDANRG---KRGAAIRYLFTKAGAEPLGFQSQPIDYDYYYDRQLLPILEPILAVL 786
                  R    + G  I Y+ T AG EPL  +  PIDYD+Y  RQL P+ + IL  L
Sbjct: 719 EFNRKEGRPLQYQNGGWISYVMTVAGPEPLETRRSPIDYDHYLTRQLQPVADAILPFL 776