Pairwise Alignments

Query, 801 a.a., DNA polymerase II (RefSeq) from Shewanella amazonensis SB2B

Subject, 788 a.a., DNA damage-inducible DNA polymerase II from Paraburkholderia bryophila 376MFSha3.1

 Score =  629 bits (1621), Expect = 0.0
 Identities = 360/793 (45%), Positives = 494/793 (62%), Gaps = 22/793 (2%)

Query: 19  LLRGRVLTRANVQRSGDTVLEYLIKTVNGPVKVEVHNQRPMAFCHSDDVERL-LVEGAET 77
           L +G +LTR        T +++ + T  GP  + + +Q  +AF  ++  ER   +   E 
Sbjct: 4   LEQGFILTRHWRDTPAGTEVDFWLATDGGPRHIRLRHQTSVAFIPAEQRERAETILRREA 63

Query: 78  EVWSHPLELQSFSRQPVHAIYCRTGLMLKRLVNRAQELGIALYEADIKPEQRFLIERFVA 137
            +    LEL+ F  +PV  +YC     L     R ++ G+ +YEADI P +R+++ERF+ 
Sbjct: 64  PLDLRSLELRDFHHRPVMGLYCPQYRQLTAFEKRLKQGGVDVYEADIFPPERYMMERFIT 123

Query: 138 LDAEFFGHFDSSGPSRFVASRVRATSQHIP-LKAVSLDIECSMSGELYSIGLYGDCEPKV 196
               F G  D +     V   ++  + + P LK VSLDIE S+  ELYSI L G  + +V
Sbjct: 124 APVMFSG--DHARDGALVNGELKPAADYRPSLKLVSLDIETSVHAELYSIALEGCGQRQV 181

Query: 197 IIVGEGETELTCHRDGVEHKVAVEWACDEVALLLSLQRWFMEVDPDILLGWAVVTFDLSL 256
            ++G        + D  E    +E+      LL  L  W    DPD ++GW +V FDL +
Sbjct: 182 YMLGPP------NGDASELDFDLEYCETRAQLLEKLNTWMERHDPDAIIGWNLVQFDLRV 235

Query: 257 LWRRAKHHGMRLCIGRFGKPLAWKVED-KHRPETLDLSGRVVLDGIDWLKAAFYQFDSFA 315
           L + A+ + + L +GR G  + W+    K        +GR+++DGI+ L++A + F SF+
Sbjct: 236 LQQHAEQYRVPLRLGRGGAAMEWREHGLKQNHYFAGAAGRLIIDGIEALRSATWSFPSFS 295

Query: 316 LDRVAGELLGEGKAIHNPDDRGEEITRLFREDKAALAYYNLTDCRLVWDIFQKTDLIHFA 375
           L+ V+  +LGEGKAI NP  R +EI R F EDK ALA YNL DC LV  IF KT+L+ F 
Sbjct: 296 LEHVSRAVLGEGKAIDNPYQRMDEIQRRFDEDKPALARYNLKDCELVTRIFAKTELLPFL 355

Query: 376 LERARLTGLEFGRVGASIAAFNHLYLPHLHRAGFVAPAMQTVPGPDSPGGYVMDSVPGLY 435
           LERA +TGL   R G S+AAF HLY+P +HR G+VAP +  V G  SPGG+VMDS PGLY
Sbjct: 356 LERATVTGLPADRSGGSVAAFTHLYMPRMHRQGYVAPNLGDVAGAASPGGFVMDSRPGLY 415

Query: 436 RNVLVLDYKSLYPSIIRTFLIDPKGLVLGLSEP-EAMSVEGFRGARFSRQSPILPKLVAT 494
            +VLVLDYKSLYPSIIRTFLIDP GLV G+  P +  SV GF GARFSR    LP +V+ 
Sbjct: 416 DSVLVLDYKSLYPSIIRTFLIDPVGLVEGMLNPADDQSVPGFLGARFSRTRHCLPSIVSQ 475

Query: 495 LASRREEAKANQNGPMSQAVKIIMNSLYGVLGSRGCVFHDYRLASSITLRGHEIMRTTKA 554
           +   RE AK  QN P+SQA+KIIMN+ YGVLGS GC F D RLASSIT+RGHEIM  T+ 
Sbjct: 476 VWQGRETAKREQNKPLSQALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRE 535

Query: 555 WIEAEGFQVIYGDTDSTFVWLGDEAGNAKAT--GRALVDMVNQRWREQLREDKGLECFLE 612
            I+AEG++VIYGDTDSTFVWL    G  +A+  GR LVD +N  WR+ L++  GLE  LE
Sbjct: 536 LIQAEGYEVIYGDTDSTFVWLKHAHGEEEASRIGRTLVDHINAWWRQDLQQRFGLESALE 595

Query: 613 LEFERHFEQFFMPTLRHSTEGSKKRYVGL--YDNGNEKVLVFKGMEQVRSDWSPLARRVQ 670
           L+FERH+ +FFMPT+R + EGSKKRY GL    +G+E++ V+KG+E VR+DW+PLA++ Q
Sbjct: 596 LQFERHYRRFFMPTIRGAEEGSKKRYAGLTVLPDGSEEI-VYKGLETVRTDWTPLAQQFQ 654

Query: 671 YELYRRLFQQENLTEYVQEVEKSLYSGELDDELVFHKRLKRDISQYTAKSAPHVKAAAL- 729
            ELYRR+F Q+   +YV++  +   +G+LDD+LV+ KRL+R +  Y     PHV+AA + 
Sbjct: 655 QELYRRIFTQQPYQDYVRDYVRDTLAGKLDDQLVYRKRLRRPLGDYERNVPPHVRAARVA 714

Query: 730 --LVSATGDANRGKRGAAIRYLFTKAGAEPLGFQSQPIDYDYYYDRQLLPILEPILAVLK 787
                  G   + + G  I Y+ T AG EPL      IDY++Y  RQL P+ + IL +L+
Sbjct: 715 DEFNRRQGRPLQYQNGGWISYVMTIAGPEPLETLRSAIDYEHYLTRQLQPVADAILPLLR 774

Query: 788 INYQK--SGAEQL 798
            ++ +  SG +QL
Sbjct: 775 DDFTRLTSGQKQL 787