Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 633 a.a., ATP-dependent helicase, DinG family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  206 bits (523), Expect = 4e-57
 Identities = 181/688 (26%), Positives = 322/688 (46%), Gaps = 80/688 (11%)

Query: 10  IRAIYKD--IAAALPNFRSRREQNYMVAEISKTLAGEYDKHRRIIVVEAGTGIGKSLSYI 67
           +RA   D  +A  +  F +R+ Q  M   IS  +A + +      V+EAGTG+GK+ +Y+
Sbjct: 2   LRAFASDGVLAKHIQGFSARQSQVQMAQIISNAIASKGNA-----VIEAGTGVGKTFAYL 56

Query: 68  LGTIPLALTQKKKVCIATATVALQEQLLHKDLPFFLAQSGLNFRFGLVKGRQRYVCLAKL 127
           +     A+   K+V ++T +  LQEQL  KDLP   A  G+  +  L+KGR  Y+C  +L
Sbjct: 57  IP----AMLSGKQVIVSTGSKNLQEQLFLKDLPALTAMLGIAPKLALLKGRNNYLCQYRL 112

Query: 128 EMLIGDNNGTQMAMWQTKPDTAQVEMLQKLHSDFHKGLWNGEIDTLETPIPDH-LWQQIA 186
           +  + + +  +  +     D  ++     +  D       G+I  L +   +      + 
Sbjct: 113 DRQMQEASHIEARLLD---DLLKINQWAGMSKD-------GDIGGLTSVAENSPALPLVV 162

Query: 187 CDKHSCHRQNAS-HRQCPFHKAREDVDTWDVLIANHSLLFADLEL---GGGIILPDPEEM 242
             K +C  Q    +  C   KAR       +++ NH L FAD  L   G   +LPDP+ +
Sbjct: 163 STKETCLGQRCEFYDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVV 222

Query: 243 FYVIDEAHHLPVVARDFSSAQATLRGAADWLEKIGKTAAKLQNQIKSNNIIAPSQAMQDH 302
            +  DEAH LP +   +   Q++ R   D+L+K+                    Q  Q  
Sbjct: 223 IF--DEAHLLPDICVSYFGQQSSSRTIDDYLQKL-------------------LQIYQTE 261

Query: 303 VADIAGMLNQVAHYCDGEKARFDNPENRLRFTHGALPEVLKRHAENLATATSGALKQFNK 362
           ++D      Q+A +C    A+  +  N L     +   VL  + +++A A+   L +   
Sbjct: 262 LSDTG----QIAQFCQRCLAKLSDWHNGLFSIAESDWRVLLGN-KSIALASWDLLAELTA 316

Query: 363 MQLLLGEAIKDGDIPRHQADTLQTETGFMLQRLENLHKLWKMMAKEDSKKGAPTARWIEL 422
           +Q LL   +   ++     D +  +   +  +L +  +     A    + G+   R++  
Sbjct: 317 LQKLLLAHVGRSEL----LDDIAVKLAELNHKLNHFFQCDNPQAAYSVEFGS---RFV-- 367

Query: 423 LPANKQVDYLLCASPIEVGFMLESMLWEKAAGVVLCSATLRALNQFDYFAHQVGLSLHDG 482
                    +L  SPI +    + +     + +   SATL+      +FA ++G+S  D 
Sbjct: 368 ---------MLRISPINIARECQQLFVANTSWI-FTSATLQVNRSLAHFAKELGIS--DA 415

Query: 483 SRYLALQSPFDFENNATLYLPKMRTEPTDDNYT-DELAEHILKLTEHEMA-SLVLFASYW 540
             ++ L SPFD+   A   +P+      +      +L +  +K  E     + +LF S+ 
Sbjct: 416 KAHI-LDSPFDYPRQALFCVPRQLGNVANQQQALKQLVDVCVKAIEAAQGRTFILFTSHK 474

Query: 541 QMEKVADIIGPKLKIPLLIQGNSPRQLLLDSHKKRCDEGKPSLLFGTGSFSEGLDLPGEY 600
            +E+ A  +  + + PLL+QG + +Q LL   ++  +    ++L GT SF EG+D+ G+ 
Sbjct: 475 MLEQTALALRTRTQYPLLVQGQAGKQSLLTKFRQLGN----AVLLGTSSFWEGVDVRGKL 530

Query: 601 LTNLIVTKLPFAVPTSPVEQAHAEYIKEKGGNPFLQLTIPDASRKLIQSCGRLLRKEQDY 660
           L+ +I+ KLPF  P  P+ +A A+ I  +GG+PF Q+++P A   L Q  GRL+R E+D 
Sbjct: 531 LSCVIIDKLPFVSPDEPLYRARADNISRQGGDPFTQVSLPQAIIALKQGVGRLIRDEKDC 590

Query: 661 GRITILDRRLVSKRYGKSLLDALPPYRR 688
           G + + D R+V++ YG++ L++LPP  R
Sbjct: 591 GVLILCDNRIVNRAYGQAFLNSLPPMAR 618