Pairwise Alignments

Query, 1899 a.a., omega-3 polyunsaturated fatty acid synthase PfaC (RefSeq) from Shewanella amazonensis SB2B

Subject, 1602 a.a., Probable polyketide synthase Pks8 from Mycobacterium tuberculosis H37Rv

 Score =  174 bits (442), Expect = 7e-47
 Identities = 135/464 (29%), Positives = 212/464 (45%), Gaps = 39/464 (8%)

Query: 1   MAGRFPGA-DDADAFWSLITEGKDAHSPICQDKLGAPVAAYLGEQGTSDRFYCDKGGYLR 59
           M  R+PG  D  +  W L+ +G+DA S    D+       +  +     + Y  +G +L 
Sbjct: 41  MGCRYPGGVDSPETLWELVAQGRDAVSDFPADRGWDVDGLFDPDPDACGKMYTRRGTFLE 100

Query: 60  NFRFSPEGY--AKPASAMAELATQVDEHQLWALDVAKLALQSLSSSPDKARCGVVMGTLS 117
           +      G+    P+ A+A     +D  Q   L+V+  AL+     P K R G   G   
Sbjct: 101 HAGDFDAGFFGIGPSEALA-----MDPQQRLLLEVSWEALERTGIDPTKLR-GSATG--- 151

Query: 118 FPTKASNRAFLPLYHRAVENGLKARLPGFPPLQPFDGQSELESQLWLQDTAADASALISE 177
                       ++   +  G   +L G           ELE       T + AS  ++ 
Sbjct: 152 ------------VFAGVIHAGYGGQLSG-----------ELEGYGLTGSTLSVASGRVAY 188

Query: 178 CLGLEGVSLSLDAACASSVYAIKLACDYLATGKADVMLAGAVSGADPFFISMGFSIFHAF 237
            LGLEG ++S+D AC+SS+ A+ LA   L +G+ D+ LAG V+        + FS   A 
Sbjct: 189 VLGLEGPAVSVDTACSSSLVALHLAVQSLRSGECDLALAGGVTVMATPAAFVEFSRQRAL 248

Query: 238 PDHGLSAPLDKHSGGLYAGEGAGVLVLKRLDDAKRDGDTIHGIIRGVGLSNDGRGQFVLS 297
              G        + G    EGAGVLV++RL DA+R G  +  ++RG  ++ DG    + +
Sbjct: 249 ARDGRCKVYAGAADGTAWSEGAGVLVVERLVDARRLGHPVLALVRGSAVNQDGASNGLTA 308

Query: 298 PASKGQIKAFERAYDEAGIAPGAVEVVECHATGTPLGDKVELTSLESFFESRLDGSAPPL 357
           P    Q +    A   A +    V+VVE H TGT LGD +E  +L + +    D   P  
Sbjct: 309 PNGPSQQRVIRAALASARLRAVEVDVVEGHGTGTMLGDPIEAQALLATYGQ--DRVEPLW 366

Query: 358 IGSVKSNLTHLLTAAGMPGIIKLMLAMKHKLLPPTVRLSSPLSSPRGLFGEDQMVTSARP 417
           +GS+KSN+ H   AAG+ G+IK++ AM+H ++P T+ +  P        G   ++T  R 
Sbjct: 367 LGSIKSNIGHTSAAAGVAGVIKMVQAMRHGVMPKTLHVDVPTPHVDWSVGAVSLLTQPRA 426

Query: 418 WPAKTQNSACVAGLSVFGFGGCNAHLVLESPDAADAILANRLRP 461
           W    +     AG+S FG  G NAH++LE     ++++     P
Sbjct: 427 WSVHGRPRR--AGVSSFGISGTNAHVILEQAPVVESVVPEVASP 468