Pairwise Alignments

Query, 1899 a.a., omega-3 polyunsaturated fatty acid synthase PfaC (RefSeq) from Shewanella amazonensis SB2B

Subject, 2553 a.a., Beta-ketoacyl synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  195 bits (495), Expect = 8e-53
 Identities = 142/461 (30%), Positives = 222/461 (48%), Gaps = 47/461 (10%)

Query: 6    PGADDADAFWSLITEGKDAHSPICQDKLGAPVAAYLGE-QGTSDRFYCDKGGYLRNFRFS 64
            P A D  A+W  I +  DA   + + +       Y  E +   D+ Y   GG+L    F+
Sbjct: 705  PKARDFAAYWENILDAVDAIEEVPERRWDW--RRYFDENRDAPDKIYSKWGGFLDEIDFN 762

Query: 65   PEGYAKPASAMAELATQVDEHQLWALDVAKLALQS-------LSSSPDKARCGVVMGTLS 117
            P  Y  P   M      ++  QL AL+  + AL++       +  +  + +  V++G   
Sbjct: 763  PVKYGIPPKTMPS----IEPLQLLALETVRQALENAGFKDGVIEDAELRRKTSVIIGVGG 818

Query: 118  ----FPTKASNRAFLPLYHRAVENGLKARLPGFPPLQPFDGQSELESQLWLQDTAADA-- 171
                   + + R+ +P  + A+     ARLP                  W +D+      
Sbjct: 819  GAGPLGQRYAVRSSMPAINGAMTEVADARLP-----------------TWTEDSFPGILL 861

Query: 172  ---SALISECLGLEGVSLSLDAACASSVYAIKLACDYLATGKADVMLAGAVSGADPF--- 225
               +  ++    L GV+ ++DAAC SS+ A+ +A   L    +D+++ G   GAD F   
Sbjct: 862  NVIAGRVANRFDLGGVNFTVDAACGSSLAAVMMASRELENHTSDMVIVG---GADSFQNP 918

Query: 226  FISMGFSIFHAFPDHGLSAPLDKHSGGLYAGEGAGVLVLKRLDDAKRDGDTIHGIIRGVG 285
            F  + FS   A    G     D  + G+   EG  ++VL+RLD A+  GD I+ ++RGV 
Sbjct: 919  FDFVAFSKTRALSPRGRCRTFDASADGIAISEGLAMMVLRRLDAAEAAGDRIYAVLRGVA 978

Query: 286  LSNDGRGQFVLSPASKGQIKAFERAYDEAGIAPGAVEVVECHATGTPLGDKVELTSLESF 345
             S+DG+   + +P ++GQ +A  RAY  AGI+PG V  VE H TGT +GD+ E+ SL   
Sbjct: 979  GSSDGKDLSLTAPRAEGQQEALRRAYAHAGISPGTVGAVEAHGTGTVVGDRTEIQSLSKV 1038

Query: 346  FESRLDGSAPPLIGSVKSNLTHLLTAAGMPGIIKLMLAMKHKLLPPTVRLSSPLSSPRGL 405
            F    D      +GSVKS + H   AAG  G+IK+ +A+ H++LP T+ ++ P  S    
Sbjct: 1039 FAEARDDRQFCGVGSVKSMIGHTKAAAGCAGMIKMAMALHHRVLPATLNVTEPNPSADFP 1098

Query: 406  FGEDQMVTSARPWPAKTQNSACVAGLSVFGFGGCNAHLVLE 446
                 ++T  RPW   T ++   AG+S FGFGG N H+VLE
Sbjct: 1099 NSPFYVLTETRPWLNPT-DTPRRAGVSAFGFGGTNFHVVLE 1138



 Score = 60.5 bits (145), Expect = 3e-12
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 10/204 (4%)

Query: 493 IKDNKHALVPLPEGRW---KGLEHLRDGSDATREANGGFIDSFELDFLRFRLPPHPGDRL 549
           I D   A+  +PE RW   +  +  RD  D      GGF+D  + + +++ +PP     +
Sbjct: 717 ILDAVDAIEEVPERRWDWRRYFDENRDAPDKIYSKWGGFLDEIDFNPVKYGIPPKTMPSI 776

Query: 550 VAQQLLLMKVADEAIRDAGLETGSKVAVLVAMETELELHQFRGRVNLHTQLADSLARAGI 609
              QLL ++   +A+ +AG + G      +  +T + +    G   L  + A   +   I
Sbjct: 777 EPLQLLALETVRQALENAGFKDGVIEDAELRRKTSVIIGVGGGAGPLGQRYAVRSSMPAI 836

Query: 610 VLSDDEYQALEQLAMDAVLPSASLNQYTSYIGNIMASRVASQWDFNGPAFTLSAGELSVA 669
                   A+ ++A DA LP+ + + +   + N++A RVA+++D  G  FT+ A   S  
Sbjct: 837 ------NGAMTEVA-DARLPTWTEDSFPGILLNVIAGRVANRFDLGGVNFTVDAACGSSL 889

Query: 670 RALEVAGNLFATQQLDAVVVAAVD 693
            A+ +A         D V+V   D
Sbjct: 890 AAVMMASRELENHTSDMVIVGGAD 913