Pairwise Alignments

Query, 1899 a.a., omega-3 polyunsaturated fatty acid synthase PfaC (RefSeq) from Shewanella amazonensis SB2B

Subject, 2624 a.a., beta-ketoacyl synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  240 bits (612), Expect = 2e-66
 Identities = 160/467 (34%), Positives = 242/467 (51%), Gaps = 41/467 (8%)

Query: 1   MAGRFPGADDADAFWSLITEGKDAHSPICQDKLGAPVAAYLGEQGTSDRFYCDKGGYLRN 60
           MA  F  +   + FW LI +  DA + + +         Y  ++  +D+ YC +GG++  
Sbjct: 34  MASIFANSRYLNKFWDLICDKIDAITDVPESHWSID-DYYDADKSKADKSYCKRGGFMPE 92

Query: 61  FRFSPEGYAKPASAMAELATQVDEHQLWALDVAKLALQ--SLSSSPDKARCGVVMGTLSF 118
             F+P  +  P + + EL    D  QL +L VAK  LQ  +L    D+ R G+ +G    
Sbjct: 93  VDFNPMEFGLPPNIL-ELT---DSSQLLSLVVAKEVLQDANLPDDYDRDRIGITLGIGG- 147

Query: 119 PTKASNRAFLPLYHRAVENGLKARLPGFPPLQPF---DGQSELESQL-----------WL 164
                         + + + L ARL  +P L+      G S+ +S+L           W 
Sbjct: 148 -------------GQKLSHSLNARLQ-YPVLKKVFKSSGLSDEDSELLIKKFQDQYVHWE 193

Query: 165 QDTAADA-----SALISECLGLEGVSLSLDAACASSVYAIKLACDYLATGKADVMLAGAV 219
           +++   +     +  I+    L G++  +DAACA S+ A+++A   L  G++D+M+ G V
Sbjct: 194 ENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALTELTEGRSDMMITGGV 253

Query: 220 SGADPFFISMGFSIFHAFPDHGLSAPLDKHSGGLYAGEGAGVLVLKRLDDAKRDGDTIHG 279
              +  ++ M FS   AF  +    P D  S G+  GEG G++ LKRLDDA+RDGD I+ 
Sbjct: 254 CTDNSPYMYMSFSKTPAFTTNEQIQPFDIDSKGMMIGEGIGMVALKRLDDAERDGDRIYA 313

Query: 280 IIRGVGLSNDGRGQFVLSPASKGQIKAFERAYDEAGIAPGAVEVVECHATGTPLGDKVEL 339
           +I+GVG S+DG+ + + +P  +GQ KA ERAYD+AG AP  V ++E H TGT  GD  E 
Sbjct: 314 VIKGVGASSDGKFKSIYAPRPEGQAKALERAYDDAGFAPHTVGLIEAHGTGTAAGDVAEF 373

Query: 340 TSLESFFESRLDGSAPPLIGSVKSNLTHLLTAAGMPGIIKLMLAMKHKLLPPTVRLSSPL 399
             L S F    +      +GSVKS + H  + AG  G+IK  LA+ HK+LPPT+ +S P 
Sbjct: 374 NGLTSVFSKDNEQLQHIALGSVKSQVGHTKSTAGTAGVIKAALALHHKVLPPTINVSQPN 433

Query: 400 SSPRGLFGEDQMVTSARPWPAKTQNSACVAGLSVFGFGGCNAHLVLE 446
                      + T ARPW  ++ ++   AG+S FGFGG N HLVLE
Sbjct: 434 PKLNIAHSPFYLNTEARPWIQRSDDTPRRAGISSFGFGGTNFHLVLE 480



 Score = 58.5 bits (140), Expect = 1e-11
 Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 31/301 (10%)

Query: 445 LESPDAADAILANRLRPGFKDTASGDLGIDGLAGHFGAATHVSELARLIKDNKHALVPLP 504
           L + + AD  L  RL+          + I G+A  F  + ++++   LI D   A+  +P
Sbjct: 10  LSTDEKADKRLNKRLK-------DMPIAIVGMASIFANSRYLNKFWDLICDKIDAITDVP 62

Query: 505 EGRWKGLEHL---RDGSDATREANGGFIDSFELDFLRFRLPPHPGDRLVAQQLLLMKVAD 561
           E  W   ++    +  +D +    GGF+   + + + F LPP+  +   + QLL + VA 
Sbjct: 63  ESHWSIDDYYDADKSKADKSYCKRGGFMPEVDFNPMEFGLPPNILELTDSSQLLSLVVAK 122

Query: 562 EAIRDAGLETG---SKVAVLVAMETELEL-HQFRGRVNLHTQLADSLARAGIVLSDDEYQ 617
           E ++DA L       ++ + + +    +L H    R+  +  L      +G  LSD++ +
Sbjct: 123 EVLQDANLPDDYDRDRIGITLGIGGGQKLSHSLNARLQ-YPVLKKVFKSSG--LSDEDSE 179

Query: 618 ALEQLAMDAVLPSASLNQYTSYIGNIMASRVASQWDFNGPAFTLSAGELSVARALEVAGN 677
            L +   D  +     N +   +GN++A R+A+++D  G    + A       A+ +A  
Sbjct: 180 LLIKKFQDQYVHWEE-NSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALT 238

Query: 678 LFATQQLDAVVVAAVDLAGSAEKIWHWGNA-------------LQAMGLPPGEGAGALVL 724
                + D ++   V    S      +                + + G+  GEG G + L
Sbjct: 239 ELTEGRSDMMITGGVCTDNSPYMYMSFSKTPAFTTNEQIQPFDIDSKGMMIGEGIGMVAL 298

Query: 725 K 725
           K
Sbjct: 299 K 299