Pairwise Alignments

Query, 854 a.a., DNA mismatch repair protein MutS (RefSeq) from Shewanella amazonensis SB2B

Subject, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

 Score =  841 bits (2172), Expect = 0.0
 Identities = 461/861 (53%), Positives = 599/861 (69%), Gaps = 19/861 (2%)

Query: 8   DLEKHTPMMRQYLTMKAAHPDMLLFYRMGDFYELFYDDAKRASEMLSISLTARGKSGGDP 67
           D   HTPMM+QYL +K+ HP  LLFYRMGDFYELF++DA++A+ +L I+LT RG+S G P
Sbjct: 8   DPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGLP 67

Query: 68  IPMAGIPYHAVEGYLAKLVQLGQSVAICEQIGDPATAKGPVERKVVRVVTPGTLTDEALL 127
           I MAG+PYHAVE YLAKLV++G+SV ICEQ+GDPAT+KGPVER V R+VTPGTLTD ALL
Sbjct: 68  IKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGTLTDAALL 127

Query: 128 QERQDNLLAAVYQGKVGYGFATLDVASGRFVIAELPSREALEAELQRTSPAELLYSEDFG 187
            E++D LL A+  G+  +G A L++ASG F ++E+ + E L A L+R  PAE+L  +   
Sbjct: 128 DEKRDTLLMALTGGRGVWGLAWLNLASGEFRVSEVAT-EKLAATLERIRPAEVLLPDSL- 185

Query: 188 DMGLINHIRGKRRRPEWEFDYDTCIKMLLEQFGTRDLRGFGIADARLSLQAAGCLMQYVK 247
            +  +N      RRP+W FD +   ++LLE F  + L  F   D R +L AAG L+QY +
Sbjct: 186 -VPEVNISAATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAGALLQYAQ 244

Query: 248 DTQRTALPHINSIVRFNQGDSIILDAATRRNLELTVSLSGSRENTLASVLDNTVTAMGSR 307
            TQ  ALPH+  ++   +   + LDAATRRNLELT +L G    TL S+LD+ +TAMG+R
Sbjct: 245 ATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSCITAMGAR 304

Query: 308 MLQRWIHQPLRCHDTIRGRQQAVQELL--ETGLYEDLRAELKALGDIERILARLALRSAR 365
            L+  +H P R       R  A+  L+     L + LR+ LK   D+ERI  R+ALR+AR
Sbjct: 305 YLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERIAGRIALRNAR 364

Query: 366 PRDFARLRDALGILPLIRERLQRCDARHLKSLNILLGDFPEEYELLCRAIVDNPPVLIRD 425
           PRD + LRD+L  L  +R  L    +  L  L   L    E  ELL RAI   P  ++RD
Sbjct: 365 PRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEAPVEAIELLLRAIAQEPAAMVRD 424

Query: 426 GGVIREGYDSELDEWRKLSDGGIDYLEQMELREKERTGIATLKVGFNRVHGYYIEVSRAQ 485
           GGV+  G+D+ELDE R L+D    +L  +E REKERTGIATLKV +NRVHG+YIEV+ A 
Sbjct: 425 GGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGFYIEVTHAN 484

Query: 486 SALVPIAYQRRQTLKNTERYITPELKEYEEKVLSSQGKALALEKQLWEELFDLILPKLQE 545
           +  VP  Y+RRQTLKN ERYITPELK +E+K LS+Q +ALA EK L+E++ D + P + +
Sbjct: 485 ADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWLYEQVLDQLQPVVPQ 544

Query: 546 LQDFALAASELDVLANFADRADLFNYHCPELSDTTGILIEAGRHPVVERVSQSP---FIP 602
           LQ  A A ++LD+LA+FAD A   N+  PE +D  G+ +EAGRHPVVE   Q+    FIP
Sbjct: 545 LQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPVVENELQAQGDTFIP 604

Query: 603 NPVELSN----HRRMLIVTGPNMGGKSTYMRQVALITLMAHIGSFVPAERALIGPVDRIF 658
           N ++L       RR+L++TGPNMGGKSTYMRQ ALI L+AH+G +VPA+ A +GP+D+IF
Sbjct: 605 NDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHVGCYVPAKAARLGPMDQIF 664

Query: 659 TRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGMSLAWSAAEY 718
           TRIGASDDLASGRSTFMVEMTE+A ILHNAT  SLVLMDE+GRGTST+DGM+LA +   +
Sbjct: 665 TRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRGTSTFDGMALAMAILRH 724

Query: 719 LAQKLGAMTLFATHYFELTQLPEMLPGVHNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQ 778
           L +K  ++TLFATHYFELT+L    P + NVHLDA+EH D I F+HAV+EG A++SYG+Q
Sbjct: 725 LLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVFLHAVEEGPANQSYGIQ 784

Query: 779 VAALAGVPANVIKAAKHKLLQLESRDHGVDMSKQQALPLTMTPE--PSA----AELRLEA 832
           VAALAG+P+ V++AAK +L QLE+R   VD  +         P+  P A    A  RL  
Sbjct: 785 VAALAGIPSAVVRAAKKELRQLETR-AAVDPLQPDLFAAVPAPDEGPEAPAHPALERLGE 843

Query: 833 IDPNDLSPRQALELLFELKRL 853
           IDP+ LSPR+AL+LL+ELK L
Sbjct: 844 IDPDSLSPREALDLLYELKTL 864