Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  389 bits (998), Expect = e-113
 Identities = 191/298 (64%), Positives = 232/298 (77%)

Query: 1   MREHPGSELELIYLFVQLVDAGSLSAVADRLSMPVATVSRKLSRLEENRGRQLLMRSTRK 60
           M +  G EL+LIYLFV LV+AGS S  A  L MP+ATVSRKL++LEE   +QL MRSTRK
Sbjct: 1   MADDVGGELQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRK 60

Query: 61  IRLTEEGMALYERYKSLVSAVDALYGDGEDPLEGTLRIAAPISIISMIFMKTINEFRREY 120
           +RLTEEG+AL++RY+S+++  D L G G D  EGTLRIAAPISIIS+IF+  +NEF R Y
Sbjct: 61  LRLTEEGLALFQRYQSVIAQFDELSGIGSDKPEGTLRIAAPISIISIIFIHALNEFGRLY 120

Query: 121 PGIRLHITQKNEVVDLIDKGIDIAIVGGIQPDSSWIAVPLGTLDYRLVASPGYLQRRGMP 180
           P IRLHI+Q NE+VDLIDKGID+AIVGG QPDSSW++  LG LDYRL A+P YL      
Sbjct: 121 PDIRLHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPEL 180

Query: 181 THPSSLAAHDIIKVWPLYNWSLRHPQGEAFYYDGPASLTLTDLQGAISACVDDGGILYGP 240
           THP  L  H +IKVWPL+NW L+HP GE+FY++GP  LTLTDL GAI A +D GGILYGP
Sbjct: 181 THPDDLENHQLIKVWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGP 240

Query: 241 ELFFKQELQRGLLLPVLPDWRGETRRISILCHQRQQQPAKVKAFIDFMKSRAPGLFTM 298
           ELF KQ+++ G L  +LP+W GE RRISIL HQR QQP KV+ FI+FM+S+AP LF+M
Sbjct: 241 ELFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQSKAPELFSM 298