Pairwise Alignments

Query, 315 a.a., transporter, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 314 a.a., AEC family transporter from Rahnella sp. WP5

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 81/313 (25%), Positives = 148/313 (47%), Gaps = 34/313 (10%)

Query: 4   LLIPLLAVVAVMIAGAASSRLLPGWLER----FLNQYVYYLAFPAILYVSLAKTPIEQIL 59
           LL  L  +V +M+ G  S +L  G+++R     L   V   A P  L++    T   +I 
Sbjct: 5   LLSSLFPLVFIMVLGWLSGKL--GYMKRDDATVLATVVIRFALPLHLFIGALHTDPAKIQ 62

Query: 60  NPGFVLGYLLAMVVTYVL---VQLWSLKHEQGQPRPASLRALSATFGNTAFIGIPVLAML 116
           N  F+   ++ ++ +Y+L   +  W  +H+    + +++++L   F + A+ G PVLA+L
Sbjct: 63  NLSFMAVLVIGLMGSYLLTLCISRWFFRHDI---KTSAIQSLVCAFPDMAYFGAPVLAVL 119

Query: 117 FPDNPQALMAAALASLL-SVLMFAVTVVQLR-------LASQPLTGIARLSLALRVVSRN 168
               P+  +   + +L+ SVLM  +T+V +R       LA Q   G   L+   + V RN
Sbjct: 120 I--GPEGFLGVLVGNLITSVLMIPLTIVLIRMGDKNSDLAQQGSLGKMILNNLFKAV-RN 176

Query: 169 PVVIGCALGVLASAMQFSLPPILEPLVTWIGKSSSPCALFAIGIAL---ARSMREPEHSR 225
           P+V    LGV+ S     +P +L   V  +GK++   +LFA+G+       ++     + 
Sbjct: 177 PIVWIPVLGVVMSLAGIKIPELLSSSVEMMGKTAGGISLFALGLLFFGERPTLNIHTVTN 236

Query: 226 VGVPFWHVNLAKLALQPLLVWLLFSWFGVDTQLTVMGVLLSAMPTAASVYLLAYQDKTLE 285
           +G+        K  +QP ++      FG+   L    V++ A P+A +  + A +  T  
Sbjct: 237 IGM--------KNLIQPAIMAAAGLAFGLSHTLMQQVVIIGATPSAIAAGMFAVRSDTYV 288

Query: 286 KQIARGIVAGTLL 298
           +  +  I+ GT L
Sbjct: 289 ESASSSILIGTAL 301