Pairwise Alignments

Query, 325 a.a., alpha/beta hydrolase fold (RefSeq) from Shewanella amazonensis SB2B

Subject, 328 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  411 bits (1056), Expect = e-119
 Identities = 203/328 (61%), Positives = 245/328 (74%), Gaps = 9/328 (2%)

Query: 4   ILTQASSNSLQKDTIFQQSLFLPYDGGQLHLRHISPASPAAARSPLLMLHGAMSNGRVFY 63
           +LT+  + SL K +  Q SL+LPY  G+LHLR + PA    ++ P+LMLHGAMSNGRVFY
Sbjct: 1   MLTRNFNPSLAKPSPSQTSLYLPYRDGELHLRQLLPAIVDFSKPPILMLHGAMSNGRVFY 60

Query: 64  SESGRGLASFLARQGFEVYVLDTAGRGLSTPKLSKGVDPGQGKVIREQLPLVQAFILERH 123
           S+SGRGL  FLA  GF VYVLDTAGRGLS PK+S+    GQG+VIREQLPLVQ ++L  H
Sbjct: 61  SQSGRGLGCFLANAGFVVYVLDTAGRGLSLPKISRDFTLGQGEVIREQLPLVQQYVLAIH 120

Query: 124 PLT---QG------VHWCGHSWGGVLMASSLVRYPDMAARVRSLLTFGSKRTIRTRSLKK 174
                 QG      VHWC HSWGGVLMAS+L RYP++   VRSLLTFGSKRTIR +S KK
Sbjct: 121 KQVCEEQGKSSPSQVHWCAHSWGGVLMASALARYPELQQSVRSLLTFGSKRTIRVKSFKK 180

Query: 175 WWMVDMFWNRLAPAIATQRGYLPADSLKLGMDNESISSLCESIDWVRGDWIDHDDGFDYA 234
           W MVD+FWNRLAP +A  +GYL AD L++GMDNES +SL +SIDWVRG+W DHDDGFDYA
Sbjct: 181 WLMVDVFWNRLAPGLAVGQGYLAADKLRVGMDNESRASLNQSIDWVRGEWRDHDDGFDYA 240

Query: 235 AAARVKGIPPAWFIAGARDTVLGNPSDVKDMMAECCAADARFTLLSRAHGYRHDYDHAGM 294
            AA +   P AWFIAG  DTVLG+P DV DM+ EC  +  ++TLLS+ +G++HDY HA M
Sbjct: 241 KAANMAKWPSAWFIAGQNDTVLGHPEDVADMINECGFSQVKYTLLSKENGFKHDYGHADM 300

Query: 295 LTHLDAPSDHFMEVADWLLGFDMTALKD 322
           LTHLDA +DHF  + DW LGF++  LKD
Sbjct: 301 LTHLDAMNDHFPLIRDWYLGFELAVLKD 328