Pairwise Alignments

Query, 148 a.a., IS1004 transposase (RefSeq) from Shewanella amazonensis SB2B

Subject, 145 a.a., IS200/IS605 family transposase IS1004 from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (544), Expect = 6e-61
 Identities = 96/140 (68%), Positives = 118/140 (84%), Gaps = 1/140 (0%)

Query: 1   MSRYESASHVFYRCQYHLVWTPKYRYKILKGNLGKELYRSIYVYCNMKKCRVVELNVQED 60
           M  Y S+SHV++RC+YH+VWTPK+R+KILKGN+ KEL RSIY+ CNMK C V+ELNVQ D
Sbjct: 1   MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDCEVLELNVQPD 60

Query: 61  HVHLVVRTPPSLSVSDLMGFVKGRTAIRMFAKFPYLRKQKLWGNHFWQRGYFVDSVGANE 120
           HVHLV   PP +S+S LMG +KGR+AIR+F KFP++RK KLWGNHFW RGYFVD+VG NE
Sbjct: 61  HVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRK-KLWGNHFWARGYFVDTVGVNE 119

Query: 121 EIIRRYVRHQEKTAKEEEKR 140
           EIIRRYVRHQ+K   E+E++
Sbjct: 120 EIIRRYVRHQDKKELEQEQQ 139