Pairwise Alignments

Query, 262 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 279 a.a., ABC-type uncharacterized transport system, permease component from Dechlorosoma suillum PS

 Score =  115 bits (287), Expect = 1e-30
 Identities = 61/224 (27%), Positives = 124/224 (55%), Gaps = 3/224 (1%)

Query: 42  VVLHAAALQQAIFTDDGQNFSLTNVISLVNWIIAFTFSVLIFRLKVIVVVPVVYACSVLS 101
           +++    L   +F      FS +  +SL+ W+  F + +  F+ ++  + P+V   +   
Sbjct: 54  MLIQGIGLYDGLFGTGEMRFSFSFALSLMLWLAVFIYWMESFKARMEGLQPMVLPLAAAC 113

Query: 102 VALLWLVPPKYITHFEHNPEVLAHVVLSLMAYSALMIAALYAIQLAMIQNKLKKKQLILS 161
             L  L P  ++     +     H + +++AYS   ++AL+A+ +   + KL ++ L  S
Sbjct: 114 AILPPLFPSAHVLPHADSVGFKLHFMAAMLAYSLFTLSALHAVFMGFAERKLHQRSLTKS 173

Query: 162 -PAMPPLMTVEKQLYHLVIIGVILLSLGLATGFIFLDDMFAEGKG--HKAILSIMAWFVY 218
             ++PPLMT+E  L+ ++I+G ILL+  L +G +F + +F +     HK + + ++W ++
Sbjct: 174 LTSLPPLMTMEALLFRMIIVGFILLTAALGSGVLFSEALFGKAMALDHKTVFAFISWGIF 233

Query: 219 IAMLWQQYSVGCRIRTAIAYTLTGATLLSLAYFGARIVKELILS 262
            A+L  +++ G R RTA+ +T+ G  +L +AY G+R V E++L+
Sbjct: 234 AALLAGRHAYGWRGRTALRWTMAGFLVLLMAYVGSRFVVEVLLN 277