Pairwise Alignments

Query, 279 a.a., 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 273 a.a., 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  213 bits (543), Expect = 3e-60
 Identities = 103/263 (39%), Positives = 173/263 (65%), Gaps = 2/263 (0%)

Query: 18  KVTTSTLMKFKQEGKKFTALTAYDASFAAAFDSEGVDVLLVGDSLGMVLQGHEDTLPVTV 77
           KVTT  L++ KQ G++ + LT+YD + A   D  G+DV+LVGDS   V+ G+  TLP+T+
Sbjct: 11  KVTTHRLVEMKQRGERISMLTSYDYTMAQIVDGAGMDVILVGDSASNVMAGNVTTLPITL 70

Query: 78  QDIAYHTRCVRRGISRALLIADLPFMSYATVE-QTMTTATALM-QAGANMVKLEGGEWLL 135
             + YH + V RG+ RA+++ D+PF SY   E + + +A  +M ++ A+ +KLEGGE ++
Sbjct: 71  DQMIYHAKSVVRGVKRAMVVVDMPFGSYQGNEMEGLASAIRIMKESHADALKLEGGEEII 130

Query: 136 ESVKKLTERGVPVCAHIGLTPQSVHVFGGFKVQGRDADNAQRILNEAKALEAAGAQLLVI 195
           ++VK++   G+PV  H+GL PQS++ +G + V+ +D   A++++ +A  LE AG   +V+
Sbjct: 131 DTVKRIISAGIPVMGHLGLMPQSINKYGTYTVRAKDDSEAEKLIRDAHLLEEAGCFAIVL 190

Query: 196 ECIPASLAKAITEALSIPVIGIGAGKDTDGQILVMHDVLGISSGYIPRFSKNYLKQTGEI 255
           E IPA+LA+ +   L+IP+IGIGAG   DGQ+LV+ D+LG+++G+ PRF + Y      +
Sbjct: 191 EKIPATLAERVASELTIPIIGIGAGGHVDGQVLVIQDMLGMNNGFRPRFLRRYADLYTVM 250

Query: 256 RAAVRAFIDEVADGSFPGPEHTF 278
             A+  ++ +V +  FP  +  +
Sbjct: 251 TDAISRYVSDVKNCDFPNEKEQY 273