Pairwise Alignments

Query, 319 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 308 a.a., multidrug ABC transporter ATP-binding protein from Burkholderia phytofirmans PsJN

 Score =  223 bits (569), Expect = 4e-63
 Identities = 130/303 (42%), Positives = 177/303 (58%), Gaps = 9/303 (2%)

Query: 12  IEGLKKTYKGGVEAVKGISLEVAKGDFFALLGPNGAGKSTTIGIISSLVQKSSGKVEVFG 71
           +  L KTY  G  A+K I+L + +G+ FALLGPNGAGK+T I II  +V  S+G V V G
Sbjct: 7   VTNLSKTYATGFHALKNINLAINRGEIFALLGPNGAGKTTLISIICGIVNASTGSVTVDG 66

Query: 72  HDIDRQLEAAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPRPEALLRAEKYLSALDL 131
            DI      A+  IGLVPQE   + FETV   V    G +G P+  A +  EK L  L L
Sbjct: 67  RDIATDYRGARSLIGLVPQELTTDSFETVWATVSFSRGLFGKPKNPAYV--EKVLRDLSL 124

Query: 132 WDKRNSPSRQLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWSFLTELNRQG 191
           W+KR+S    LSGGMKRR++IA+AL HEP++L LDEPTAGVD+ELRR MW  +  L   G
Sbjct: 125 WEKRDSKIITLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELRRDMWKLVRSLAASG 184

Query: 192 VTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKKLLAKLNMETFILDLKQDVDALPA- 250
           VTIILTTHY++EAE +   IG+I  GE++      +L+ KL  +   L L+  +  +PA 
Sbjct: 185 VTIILTTHYIDEAEEMADRIGVISAGEIMLVEEKTELMRKLGKKQLTLQLESPLAQVPAS 244

Query: 251 LDGIQCRLIDN-----HTLEVDIAKEHSLNQLFAQLSEQGIEVLSMRNKANRLEELFVAL 305
           L G    +        +T E +  +   +  L   L + GI    +    + LE++FV+L
Sbjct: 245 LAGYGLDVAKGGNELIYTYEGEGGRT-DIIALLKALDDAGIRFKDLHTTQSSLEDIFVSL 303

Query: 306 VEG 308
           + G
Sbjct: 304 LRG 306