Pairwise Alignments

Query, 504 a.a., XRE family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 510 a.a., XRE family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  738 bits (1906), Expect = 0.0
 Identities = 370/510 (72%), Positives = 416/510 (81%), Gaps = 6/510 (1%)

Query: 1   MTSEKSLMRQSHFLGTKIRNLRKRNHLTMEDLSSRCVRVDPGSAPSVSYLSMIERGKRVP 60
           M +  SLMR+SHFLGTKIRNLRKRN+LTMEDLS+RCVRVD  SAPSVSYLSMIERGKRVP
Sbjct: 1   MKTNSSLMRKSHFLGTKIRNLRKRNNLTMEDLSARCVRVDADSAPSVSYLSMIERGKRVP 60

Query: 61  SAAMLEVIAKVFEKSPDWFLDDAPEEDAITPDKGRRGGISGMALEPGFLFSKDILQIAIP 120
           SA ML VIA VF+K  DWFLDDAPEE AITP KG RGGISGMALEP FLFS +ILQIAIP
Sbjct: 61  SAGMLAVIAAVFQKEVDWFLDDAPEEQAITPVKGSRGGISGMALEPSFLFSNEILQIAIP 120

Query: 121 EMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGDKRLNLSGDDLTAICKQMGM 180
           EMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVG KR+ LS +DL AI +++G+
Sbjct: 121 EMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRMPLSLEDLLAIVQRLGL 180

Query: 181 KIRFFKEPPQDQVDANGVSTHQLVTSFFEPPSTIFINEALKKNPERLKYDLAVHIGHCVL 240
            +++F   P+   +  G     ++TS+FE P+ I +N+ L ++  RLKYDLAVHIGH VL
Sbjct: 181 VVKWFTRAPKAIREEAGAGKQHIITSYFEQPNKICLNQLLNQHTRRLKYDLAVHIGHSVL 240

Query: 241 HNKDGLKNVLAVGRGIGTGEQD-ADI---SSTVNAQDILSAWRDFESSFFAGALLCPKVP 296
           HNKDGLK+++  GR  GT   D AD    SSTV+AQDIL AWRDFESSFFAGALLCPKVP
Sbjct: 241 HNKDGLKSIMVAGRSHGTSLVDEADNRGQSSTVDAQDILHAWRDFESSFFAGALLCPKVP 300

Query: 297 FRQLLERGGYEIDTHKKIGVSASVAMRRMTVVSPYPHWHYFDAYAPGKLKAVYRGNGIPL 356
           FRQLL+R GYEID  K + VS SVAMRRMT VSPY HWHYFDAY+PGKLKAVYRGNGIPL
Sbjct: 301 FRQLLDRHGYEIDVAKLVDVSPSVAMRRMTAVSPYSHWHYFDAYSPGKLKAVYRGNGIPL 360

Query: 357 PWGNMRQVPDPCQHWAVFRMISEPSDGSSAQISILDVGGSPRIYCCESTKVVDLAGNHHV 416
           PWGNMRQV DPCQHWAVFRMI+  + GSSAQISILDV   P+IYCCES +V DLAGN HV
Sbjct: 361 PWGNMRQVEDPCQHWAVFRMINASTQGSSAQISILDVANEPKIYCCESIRVKDLAGNPHV 420

Query: 417 LCAGIDLNPAIDAQGTDALSLAEALKSHCVASGGQGEIPTAIKRQLMSIARILNINWVER 476
           LCAGIDLNPAI+AQG DA  +A+ LK  CV +GG   +P+ IK  +  +A+ILNINWVER
Sbjct: 421 LCAGIDLNPAIEAQGGDANQVAQQLKEVCVDNGGSAPLPSNIKTDIKRVAKILNINWVER 480

Query: 477 GIDKGARLICSRGNVCPRKPSCY--GGCKG 504
           GID  ARLICSRG  CPRKPSCY  GGC+G
Sbjct: 481 GIDSEARLICSRGASCPRKPSCYESGGCQG 510