Pairwise Alignments

Query, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 314 a.a., porin (RefSeq) from Shewanella sp. ANA-3

 Score =  147 bits (372), Expect = 3e-40
 Identities = 102/329 (31%), Positives = 162/329 (49%), Gaps = 47/329 (14%)

Query: 3   KSLIASAVATGAALSSFATLADGPAFYGRVDLAA-TNSNTGYATQNQKDGTVFENNFSWL 61
           K+L+ASA+A+    S++A  A+    YG++++ A +N   G +T      T  ++N S  
Sbjct: 7   KTLLASALASATLASAYA--AEPLTVYGKLNVTAQSNDEKGDST------TTIQSNASRF 58

Query: 62  GVKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQS 121
           GVKG  +LS ++   Y +E+ V+    + D F  RN FVGL+   G+  +GRND++ K S
Sbjct: 59  GVKGDFELSSSLEAFYTVEYEVDTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKIS 118

Query: 122 EGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYVMEDNYEEGSWFNPG 181
           +G  D F + + D+  L  G++RLG + TY SP I   +   ATY  E           G
Sbjct: 119 QGNVDQFNDLSGDLKSLFKGENRLGQTATYLSPSIGGFV-FGATYAAE-----------G 166

Query: 182 EDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALYQ 241
           + D+ + + ++L+A  GD  LK   +Y A AY+  + G +  R   Q K  +L LG +YQ
Sbjct: 167 DADQQAQDGFSLAAMYGDAKLKKSPFYAAIAYDSDVKGYEILRASVQGKIADLTLGGMYQ 226

Query: 242 NSEHVADKYSNLEGDT---WFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGME 298
             E        +  D+   + ++A Y +   TLKA Y QD   LG               
Sbjct: 227 QQEQTYKNSLPVNTDSVNGYLLSAAYDINAVTLKAQY-QDMEDLG--------------- 270

Query: 299 QVENVDLQQYTLGADHRLSKNTLVYGHFT 327
                    +++GAD+ L K T V+  +T
Sbjct: 271 -------DSWSVGADYSLGKPTKVFAFYT 292