Pairwise Alignments

Query, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 354 a.a., porin (RefSeq) from Shewanella sp. ANA-3

 Score =  472 bits (1214), Expect = e-138
 Identities = 228/356 (64%), Positives = 280/356 (78%), Gaps = 3/356 (0%)

Query: 1   MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSW 60
           MKK+L+ +A+A   A  SF +LADGP FYG VDL+ T+S  GYATQNQKDGTV ENNFSW
Sbjct: 1   MKKNLLTTAIAASLAFCSFNSLADGPEFYGHVDLSITDSEKGYATQNQKDGTVLENNFSW 60

Query: 61  LGVKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQ 120
           +GVKGSE +S    +IYQMEFGV NFDNS  TFN RNTF+G+++ AGT L GRND+VFK 
Sbjct: 61  VGVKGSESVSPYFDIIYQMEFGVENFDNSNKTFNARNTFLGVRSVAGTVLAGRNDTVFKA 120

Query: 121 SEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYVMEDNYEEGSWFNP 180
           SEGGFDLFGNTNADIDLL+AGQ+R  D I+YYSPKIA ++TLNATY+M DNY++    + 
Sbjct: 121 SEGGFDLFGNTNADIDLLLAGQTRSADGISYYSPKIADLITLNATYLMSDNYDQRD--SQ 178

Query: 181 GEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALY 240
           G +       YALSATLGDK  K  NYYVAAAYNDG++ I+AYRGVAQ KFG+ + GA+Y
Sbjct: 179 GNEVYNQDQMYALSATLGDKTFKTHNYYVAAAYNDGIENIEAYRGVAQAKFGDFLFGAIY 238

Query: 241 QNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVG-MEQ 299
           Q+SEH+ D++SNL G+T+F+NA Y + N  LK  YG+DDSGLGKYV R VG  D G +EQ
Sbjct: 239 QHSEHIDDRFSNLSGETYFVNAAYLMDNLKLKLVYGKDDSGLGKYVSRFVGSQDSGNLEQ 298

Query: 300 VENVDLQQYTLGADHRLSKNTLVYGHFTRFDGDMLLGGNKVSLEDDVITLGLRVDF 355
           V +VDLQQ T+GAD+RLS  T+VYGH+TRFDGD++L G K  L+D+V T+GLR+DF
Sbjct: 299 VSDVDLQQLTVGADYRLSTKTMVYGHYTRFDGDLMLAGTKQDLDDNVFTVGLRIDF 354