Pairwise Alignments

Query, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 359 a.a., porin (RefSeq) from Shewanella sp. ANA-3

 Score =  347 bits (891), Expect = e-100
 Identities = 183/370 (49%), Positives = 246/370 (66%), Gaps = 26/370 (7%)

Query: 1   MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTG-------------YATQN 47
           MKK+ I+++VA+  AL+SF  LA+GP+FYGR++LA TN+ TG             YA +N
Sbjct: 1   MKKTFISASVASVLALASFGALAEGPSFYGRLELAVTNTETGATLQSGTNGLNSNYADEN 60

Query: 48  QKDGTVFENNFSWLGVKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAG 107
              GT  ENNFS LGVKG+EK++    ++YQMEF V +   SGD F  RNT++GL+T AG
Sbjct: 61  NA-GTYLENNFSLLGVKGTEKIADGYDVVYQMEFQVESTSGSGDVFKARNTYLGLKTNAG 119

Query: 108 TALIGRNDSVFKQSEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYV 167
           T L+GRND+VFKQ+EGG D+FGNTNADID LV+ Q+R  D + Y+SPK+  ++TLNA Y+
Sbjct: 120 TVLVGRNDTVFKQAEGGVDIFGNTNADIDRLVSAQTRSADGVWYFSPKLGGLVTLNANYL 179

Query: 168 MEDNYEEGSWFNPGEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVA 227
            +DN +E     P  D   S   YALSATLGD   K QNYYVA AYN G+ G+ AYRGVA
Sbjct: 180 FDDNNDEKIDGKPAPDTNES--LYALSATLGDSKFKEQNYYVAVAYNKGIAGVDAYRGVA 237

Query: 228 QVKFGELVLGALYQNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVG 287
           Q K G+  LG L+QNSE V D  S ++G+T+F+N  Y L    LKA YG D++G GKY  
Sbjct: 238 QAKLGQFKLGGLFQNSESVTD--SAIDGNTYFVNVSYDLNGVNLKAEYGYDEAGFGKYY- 294

Query: 288 RMVGDSDVGMEQVENVDLQQYTLGADHRLSKNTLVYGHFTRFDGDML-LGGNKVSLEDD- 345
                S +G    +++ +    +GAD+RLSK+T+VYG ++ + GD     G K+ L+DD 
Sbjct: 295 -----STLGKAGADDISVNNINVGADYRLSKSTMVYGQYSMYKGDYKDTTGAKIDLQDDN 349

Query: 346 VITLGLRVDF 355
           V ++G+R DF
Sbjct: 350 VFSVGVRYDF 359